Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 AC078899.1-201ENST00000521432 1185 ntBASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 WBP1LP3-201ENST00000523033 208 ntBASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 AC239860.2-201ENST00000525886 270 ntBASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 OR5M7P-201ENST00000526140 972 ntBASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 AC138915.2-201ENST00000569776 97 ntBASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 AC137800.2-201ENST00000574375 120 ntBASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 AC015982.1-201ENST00000608113 465 ntBASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 AC005332.6-201ENST00000613178 446 ntBASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 ADAM24P-201ENST00000398655 2101 ntBASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 AC006600.2-201ENST00000624834 2506 ntBASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 AL031985.3-201ENST00000565390 2449 ntBASIC5.21□□□□□ -1.58
SEC61A2Q9H9S3 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 RNU6-839P-201ENST00000363347 108 ntBASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 RPS3AP36-201ENST00000398190 775 ntBASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AC007559.1-201ENST00000428736 355 ntBASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 PCBP2P1-201ENST00000437262 977 ntBASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AC010307.1-201ENST00000467206 836 ntBASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AC112206.1-201ENST00000468416 477 ntBASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AC099521.1-201ENST00000482557 334 ntBASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 PAICSP4-201ENST00000517543 1253 ntBASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AC060775.1-201ENST00000518241 520 ntBASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AC109635.6-201ENST00000525487 1113 ntBASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AP001189.2-201ENST00000527320 189 ntBASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AP004609.2-201ENST00000532177 190 ntBASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 OR5AL2P-201ENST00000532185 920 ntBASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 NANOGNBP2-201ENST00000544753 553 ntBASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AC091489.2-201ENST00000566263 604 ntBASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 MIR548Y-201ENST00000582739 110 ntBASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AC044792.1-201ENST00000593294 196 ntBASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AC091488.1-201ENST00000604239 660 ntBASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AL161729.4-201ENST00000604650 476 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms