Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SCAPERQ9BY12 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.97□□□□□ -1.45
SCAPERQ9BY12 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.97□□□□□ -1.45
SCAPERQ9BY12 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.97□□□□□ -1.45
SCAPERQ9BY12 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.97□□□□□ -1.45
SCAPERQ9BY12 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.97□□□□□ -1.45
SCAPERQ9BY12 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.97□□□□□ -1.45
SCAPERQ9BY12 HSPD1P15-201ENST00000505573 1122 ntBASIC5.97□□□□□ -1.45
SCAPERQ9BY12 AC016550.3-201ENST00000515706 767 ntBASIC5.97□□□□□ -1.45
SCAPERQ9BY12 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.97□□□□□ -1.45
SCAPERQ9BY12 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.97□□□□□ -1.45
SCAPERQ9BY12 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.97□□□□□ -1.45
SCAPERQ9BY12 AC107993.1-201ENST00000591343 684 ntBASIC5.97□□□□□ -1.45
SCAPERQ9BY12 AL451044.1-201ENST00000604867 238 ntBASIC5.97□□□□□ -1.45
SCAPERQ9BY12 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.97□□□□□ -1.45
SCAPERQ9BY12 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SCAPERQ9BY12 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SCAPERQ9BY12 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SCAPERQ9BY12 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SCAPERQ9BY12 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SCAPERQ9BY12 RNA5SP146-201ENST00000410743 123 ntBASIC5.96□□□□□ -1.46
SCAPERQ9BY12 CBX1P3-201ENST00000413296 527 ntBASIC5.96□□□□□ -1.46
SCAPERQ9BY12 TCEA1P2-201ENST00000420496 906 ntBASIC5.96□□□□□ -1.46
SCAPERQ9BY12 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.96□□□□□ -1.46
SCAPERQ9BY12 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.96□□□□□ -1.46
SCAPERQ9BY12 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.96□□□□□ -1.46
SCAPERQ9BY12 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.96□□□□□ -1.46
SCAPERQ9BY12 AC012417.1-201ENST00000582307 1039 ntBASIC5.96□□□□□ -1.46
SCAPERQ9BY12 MIR5187-201ENST00000583479 76 ntBASIC5.96□□□□□ -1.46
SCAPERQ9BY12 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.96□□□□□ -1.46
SCAPERQ9BY12 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.96□□□□□ -1.46
SCAPERQ9BY12 AC064801.1-201ENST00000612025 407 ntBASIC5.96□□□□□ -1.46
SCAPERQ9BY12 AP005264.7-201ENST00000625003 745 ntBASIC5.96□□□□□ -1.46
SCAPERQ9BY12 AL513548.1-201ENST00000562904 1724 ntBASIC5.96□□□□□ -1.46
SCAPERQ9BY12 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
SCAPERQ9BY12 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
SCAPERQ9BY12 RNA5SP51-201ENST00000364750 119 ntBASIC5.95□□□□□ -1.46
SCAPERQ9BY12 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
SCAPERQ9BY12 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.95□□□□□ -1.46
SCAPERQ9BY12 FABP3P2-201ENST00000453169 399 ntBASIC5.95□□□□□ -1.46
SCAPERQ9BY12 RAD23BP3-201ENST00000454157 1152 ntBASIC5.95□□□□□ -1.46
SCAPERQ9BY12 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.95□□□□□ -1.46
SCAPERQ9BY12 AC005726.1-201ENST00000494679 427 ntBASIC5.95□□□□□ -1.46
SCAPERQ9BY12 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC5.95□□□□□ -1.46
SCAPERQ9BY12 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.95□□□□□ -1.46
SCAPERQ9BY12 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SCAPERQ9BY12 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.95□□□□□ -1.46
SCAPERQ9BY12 AP002001.2-201ENST00000529025 1469 ntBASIC5.95□□□□□ -1.46
SCAPERQ9BY12 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SCAPERQ9BY12 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SCAPERQ9BY12 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SCAPERQ9BY12 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.95□□□□□ -1.46
SCAPERQ9BY12 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.94□□□□□ -1.46
SCAPERQ9BY12 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SCAPERQ9BY12 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.94□□□□□ -1.46
SCAPERQ9BY12 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SCAPERQ9BY12 RNA5SP267-201ENST00000364893 126 ntBASIC5.94□□□□□ -1.46
SCAPERQ9BY12 SKP1P3-201ENST00000429280 487 ntBASIC5.94□□□□□ -1.46
SCAPERQ9BY12 Z74696.2-201ENST00000436514 498 ntBASIC5.94□□□□□ -1.46
SCAPERQ9BY12 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.94□□□□□ -1.46
SCAPERQ9BY12 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.94□□□□□ -1.46
SCAPERQ9BY12 HMGN1P11-201ENST00000508668 303 ntBASIC5.94□□□□□ -1.46
SCAPERQ9BY12 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.94□□□□□ -1.46
SCAPERQ9BY12 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.94□□□□□ -1.46
SCAPERQ9BY12 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.94□□□□□ -1.46
SCAPERQ9BY12 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SCAPERQ9BY12 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
SCAPERQ9BY12 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.93□□□□□ -1.46
SCAPERQ9BY12 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SCAPERQ9BY12 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC5.93□□□□□ -1.46
SCAPERQ9BY12 AC083863.1-201ENST00000438811 231 ntBASIC5.93□□□□□ -1.46
SCAPERQ9BY12 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.93□□□□□ -1.46
SCAPERQ9BY12 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.93□□□□□ -1.46
SCAPERQ9BY12 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.93□□□□□ -1.46
SCAPERQ9BY12 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SCAPERQ9BY12 RN7SKP18-201ENST00000516005 275 ntBASIC5.93□□□□□ -1.46
SCAPERQ9BY12 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.93□□□□□ -1.46
SCAPERQ9BY12 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SCAPERQ9BY12 AC055839.1-201ENST00000634467 498 ntBASIC5.93□□□□□ -1.46
SCAPERQ9BY12 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
SCAPERQ9BY12 AL079305.1-201ENST00000623159 3008 ntBASIC5.93□□□□□ -1.46
SCAPERQ9BY12 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.93□□□□□ -1.46
SCAPERQ9BY12 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SCAPERQ9BY12 IL6STP1-201ENST00000346911 1020 ntBASIC5.92□□□□□ -1.46
SCAPERQ9BY12 MIR195-201ENST00000385194 87 ntBASIC5.92□□□□□ -1.46
SCAPERQ9BY12 ZNF602P-201ENST00000405929 924 ntBASIC5.92□□□□□ -1.46
SCAPERQ9BY12 PGBD4P8-201ENST00000412993 562 ntBASIC5.92□□□□□ -1.46
SCAPERQ9BY12 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SCAPERQ9BY12 OR6C64P-201ENST00000419708 825 ntBASIC5.92□□□□□ -1.46
SCAPERQ9BY12 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SCAPERQ9BY12 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SCAPERQ9BY12 AC104849.1-201ENST00000462623 405 ntBASIC5.92□□□□□ -1.46
SCAPERQ9BY12 AC021146.3-201ENST00000511911 260 ntBASIC5.92□□□□□ -1.46
SCAPERQ9BY12 DEFB109D-201ENST00000529497 240 ntBASIC5.92□□□□□ -1.46
SCAPERQ9BY12 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.92□□□□□ -1.46
SCAPERQ9BY12 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.92□□□□□ -1.46
SCAPERQ9BY12 NPM1P47-201ENST00000560843 856 ntBASIC5.92□□□□□ -1.46
SCAPERQ9BY12 SLC25A36P1-201ENST00000590111 465 ntBASIC5.92□□□□□ -1.46
SCAPERQ9BY12 AL031666.3-201ENST00000609320 1006 ntBASIC5.92□□□□□ -1.46
SCAPERQ9BY12 AC243654.2-201ENST00000612843 443 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms