Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AC104763.1-201ENST00000475274 360 ntBASIC5.59□□□□□ -1.51
SALL3Q9BXA9 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.59□□□□□ -1.51
SALL3Q9BXA9 AC093267.1-201ENST00000489176 961 ntBASIC5.59□□□□□ -1.51
SALL3Q9BXA9 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
SALL3Q9BXA9 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.59□□□□□ -1.51
SALL3Q9BXA9 BTG4P1-201ENST00000510421 183 ntBASIC5.59□□□□□ -1.51
SALL3Q9BXA9 AC093752.1-206ENST00000511823 336 ntBASIC5.59□□□□□ -1.51
SALL3Q9BXA9 RNA5SP228-201ENST00000516232 133 ntBASIC5.59□□□□□ -1.51
SALL3Q9BXA9 AP000926.4-201ENST00000527351 454 ntBASIC5.59□□□□□ -1.51
SALL3Q9BXA9 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SALL3Q9BXA9 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SALL3Q9BXA9 AP000916.1-201ENST00000533869 835 ntBASIC5.59□□□□□ -1.51
SALL3Q9BXA9 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
SALL3Q9BXA9 LYZ-203ENST00000549690 669 ntTSL 2 BASIC5.59□□□□□ -1.51
SALL3Q9BXA9 CR383656.6-201ENST00000550518 394 ntBASIC5.59□□□□□ -1.51
SALL3Q9BXA9 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC5.59□□□□□ -1.51
SALL3Q9BXA9 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC5.59□□□□□ -1.51
SALL3Q9BXA9 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.59□□□□□ -1.51
SALL3Q9BXA9 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC5.59□□□□□ -1.51
SALL3Q9BXA9 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.59□□□□□ -1.51
SALL3Q9BXA9 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.59□□□□□ -1.51
SALL3Q9BXA9 AL353778.1-201ENST00000603149 408 ntBASIC5.59□□□□□ -1.51
SALL3Q9BXA9 Mico1.1-201ENST00000611698 204 ntBASIC5.59□□□□□ -1.51
SALL3Q9BXA9 AL353726.1-201ENST00000614041 1000 ntBASIC5.59□□□□□ -1.51
SALL3Q9BXA9 AL603755.1-201ENST00000619504 163 ntBASIC5.59□□□□□ -1.51
SALL3Q9BXA9 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.59□□□□□ -1.51
SALL3Q9BXA9 AC010435.1-201ENST00000623353 1177 ntBASIC5.59□□□□□ -1.51
SALL3Q9BXA9 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.59□□□□□ -1.51
SALL3Q9BXA9 ZNF137P-201ENST00000456718 1920 ntBASIC5.59□□□□□ -1.51
SALL3Q9BXA9 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SALL3Q9BXA9 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SALL3Q9BXA9 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SALL3Q9BXA9 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SALL3Q9BXA9 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.59□□□□□ -1.52
SALL3Q9BXA9 AC020633.1-201ENST00000468439 2247 ntBASIC5.59□□□□□ -1.52
SALL3Q9BXA9 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
SALL3Q9BXA9 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
SALL3Q9BXA9 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
SALL3Q9BXA9 AC108751.5-201ENST00000492880 1336 ntBASIC5.58□□□□□ -1.52
SALL3Q9BXA9 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SALL3Q9BXA9 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
SALL3Q9BXA9 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SALL3Q9BXA9 SNORD113.2-201ENST00000364166 89 ntBASIC5.58□□□□□ -1.52
SALL3Q9BXA9 Y_RNA.599-201ENST00000410489 109 ntBASIC5.58□□□□□ -1.52
SALL3Q9BXA9 RN7SKP106-201ENST00000410832 272 ntBASIC5.58□□□□□ -1.52
SALL3Q9BXA9 RNU4-22P-201ENST00000411058 166 ntBASIC5.58□□□□□ -1.52
SALL3Q9BXA9 AL158825.1-201ENST00000414735 521 ntBASIC5.58□□□□□ -1.52
SALL3Q9BXA9 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.58□□□□□ -1.52
SALL3Q9BXA9 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.58□□□□□ -1.52
SALL3Q9BXA9 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SALL3Q9BXA9 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.58□□□□□ -1.52
SALL3Q9BXA9 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.58□□□□□ -1.52
SALL3Q9BXA9 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.58□□□□□ -1.52
SALL3Q9BXA9 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SALL3Q9BXA9 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.58□□□□□ -1.52
SALL3Q9BXA9 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.58□□□□□ -1.52
SALL3Q9BXA9 AC022336.1-201ENST00000475510 337 ntBASIC5.58□□□□□ -1.52
SALL3Q9BXA9 RN7SL817P-201ENST00000480777 288 ntBASIC5.58□□□□□ -1.52
SALL3Q9BXA9 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.58□□□□□ -1.52
SALL3Q9BXA9 AC011352.1-201ENST00000512300 793 ntBASIC5.58□□□□□ -1.52
SALL3Q9BXA9 AC008494.2-201ENST00000514544 370 ntBASIC5.58□□□□□ -1.52
SALL3Q9BXA9 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SALL3Q9BXA9 RN7SKP34-201ENST00000516142 244 ntBASIC5.58□□□□□ -1.52
SALL3Q9BXA9 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.58□□□□□ -1.52
SALL3Q9BXA9 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.58□□□□□ -1.52
SALL3Q9BXA9 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC5.58□□□□□ -1.52
SALL3Q9BXA9 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.58□□□□□ -1.52
SALL3Q9BXA9 AP004372.1-201ENST00000604842 844 ntBASIC5.58□□□□□ -1.52
SALL3Q9BXA9 AL158062.1-201ENST00000619632 745 ntBASIC5.58□□□□□ -1.52
SALL3Q9BXA9 AC022079.2-201ENST00000619739 566 ntBASIC5.58□□□□□ -1.52
SALL3Q9BXA9 AC092608.3-201ENST00000625017 386 ntBASIC5.58□□□□□ -1.52
SALL3Q9BXA9 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.58□□□□□ -1.52
SALL3Q9BXA9 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.58□□□□□ -1.52
SALL3Q9BXA9 AC104454.1-201ENST00000421341 1401 ntBASIC5.58□□□□□ -1.52
SALL3Q9BXA9 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
SALL3Q9BXA9 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SALL3Q9BXA9 EOGT-210ENST00000615922 1931 ntBASIC5.58□□□□□ -1.52
SALL3Q9BXA9 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SALL3Q9BXA9 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
SALL3Q9BXA9 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
SALL3Q9BXA9 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SALL3Q9BXA9 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.58□□□□□ -1.52
SALL3Q9BXA9 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SALL3Q9BXA9 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.58□□□□□ -1.52
SALL3Q9BXA9 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SALL3Q9BXA9 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SALL3Q9BXA9 ZNF876P-202ENST00000398732 1485 ntBASIC5.57□□□□□ -1.52
SALL3Q9BXA9 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SALL3Q9BXA9 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.57□□□□□ -1.52
SALL3Q9BXA9 AC079741.1-201ENST00000321498 212 ntBASIC5.57□□□□□ -1.52
SALL3Q9BXA9 RNU6-236P-201ENST00000363886 106 ntBASIC5.57□□□□□ -1.52
SALL3Q9BXA9 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SALL3Q9BXA9 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SALL3Q9BXA9 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SALL3Q9BXA9 RNU6-636P-201ENST00000384598 107 ntBASIC5.57□□□□□ -1.52
SALL3Q9BXA9 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SALL3Q9BXA9 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SALL3Q9BXA9 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.57□□□□□ -1.52
SALL3Q9BXA9 AP001324.1-201ENST00000428553 399 ntBASIC5.57□□□□□ -1.52
SALL3Q9BXA9 CDY14P-201ENST00000431260 1014 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms