Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
USB1Q9BQ65 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
USB1Q9BQ65 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
USB1Q9BQ65 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
USB1Q9BQ65 Y_RNA.39-201ENST00000362620 98 ntBASIC6.72□□□□□ -1.33
USB1Q9BQ65 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
USB1Q9BQ65 CREM-214ENST00000395887 849 ntTSL 5 BASIC6.72□□□□□ -1.33
USB1Q9BQ65 RPL21P1-201ENST00000399532 476 ntBASIC6.72□□□□□ -1.33
USB1Q9BQ65 KRT18P52-201ENST00000404956 846 ntBASIC6.72□□□□□ -1.33
USB1Q9BQ65 MIR1252-201ENST00000408861 65 ntBASIC6.72□□□□□ -1.33
USB1Q9BQ65 RN7SKP207-201ENST00000411204 303 ntBASIC6.72□□□□□ -1.33
USB1Q9BQ65 HMGN1P24-201ENST00000412282 298 ntBASIC6.72□□□□□ -1.33
USB1Q9BQ65 PGAM1P3-201ENST00000420790 565 ntBASIC6.72□□□□□ -1.33
USB1Q9BQ65 RPL21P91-201ENST00000429231 479 ntBASIC6.72□□□□□ -1.33
USB1Q9BQ65 RPL36P19-201ENST00000430744 301 ntBASIC6.72□□□□□ -1.33
USB1Q9BQ65 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC6.72□□□□□ -1.33
USB1Q9BQ65 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC6.72□□□□□ -1.33
USB1Q9BQ65 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC6.72□□□□□ -1.33
USB1Q9BQ65 AL590664.1-201ENST00000448065 339 ntBASIC6.72□□□□□ -1.33
USB1Q9BQ65 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC6.72□□□□□ -1.33
USB1Q9BQ65 AC005229.2-201ENST00000456995 399 ntBASIC6.72□□□□□ -1.33
USB1Q9BQ65 SCARNA18-201ENST00000459004 134 ntBASIC6.72□□□□□ -1.33
USB1Q9BQ65 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.72□□□□□ -1.33
USB1Q9BQ65 RN7SL233P-201ENST00000469988 277 ntBASIC6.72□□□□□ -1.33
USB1Q9BQ65 CREM-234ENST00000484283 660 ntTSL 5 BASIC6.72□□□□□ -1.33
USB1Q9BQ65 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
USB1Q9BQ65 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.72□□□□□ -1.33
USB1Q9BQ65 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC6.72□□□□□ -1.33
USB1Q9BQ65 AC016559.2-201ENST00000510759 359 ntBASIC6.72□□□□□ -1.33
USB1Q9BQ65 RNU6-182P-201ENST00000516970 105 ntBASIC6.72□□□□□ -1.33
USB1Q9BQ65 CYCSP22-201ENST00000517555 339 ntBASIC6.72□□□□□ -1.33
USB1Q9BQ65 AC114550.1-201ENST00000518846 573 ntTSL 4 BASIC6.72□□□□□ -1.33
USB1Q9BQ65 AC024224.1-201ENST00000538284 609 ntBASIC6.72□□□□□ -1.33
USB1Q9BQ65 LRP1-AS-201ENST00000554476 325 ntTSL 3 BASIC6.72□□□□□ -1.33
USB1Q9BQ65 HMGB3P26-201ENST00000560051 582 ntBASIC6.72□□□□□ -1.33
USB1Q9BQ65 AC024619.4-201ENST00000580924 316 ntBASIC6.72□□□□□ -1.33
USB1Q9BQ65 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC6.72□□□□□ -1.33
USB1Q9BQ65 ADGRF5P1-202ENST00000590130 980 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
USB1Q9BQ65 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC6.72□□□□□ -1.33
USB1Q9BQ65 AC005518.2-201ENST00000603254 282 ntBASIC6.72□□□□□ -1.33
USB1Q9BQ65 AL596245.1-201ENST00000618994 362 ntBASIC6.72□□□□□ -1.33
USB1Q9BQ65 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
USB1Q9BQ65 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC6.72□□□□□ -1.33
USB1Q9BQ65 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
USB1Q9BQ65 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC6.72□□□□□ -1.33
USB1Q9BQ65 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
USB1Q9BQ65 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
USB1Q9BQ65 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
USB1Q9BQ65 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
USB1Q9BQ65 TPTE2P4-201ENST00000258589 1605 ntBASIC6.72□□□□□ -1.33
USB1Q9BQ65 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
USB1Q9BQ65 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
USB1Q9BQ65 AC100810.3-201ENST00000633189 2240 ntBASIC6.72□□□□□ -1.33
USB1Q9BQ65 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC6.71□□□□□ -1.33
USB1Q9BQ65 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.33
USB1Q9BQ65 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
USB1Q9BQ65 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
USB1Q9BQ65 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
USB1Q9BQ65 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
USB1Q9BQ65 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.71□□□□□ -1.33
USB1Q9BQ65 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
USB1Q9BQ65 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.34
USB1Q9BQ65 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
USB1Q9BQ65 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
USB1Q9BQ65 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
USB1Q9BQ65 OR10R3P-201ENST00000361688 942 ntBASIC6.71□□□□□ -1.34
USB1Q9BQ65 Y_RNA.14-201ENST00000362415 103 ntBASIC6.71□□□□□ -1.34
USB1Q9BQ65 RNU6-61P-201ENST00000365528 109 ntBASIC6.71□□□□□ -1.34
USB1Q9BQ65 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
USB1Q9BQ65 MT-TW-201ENST00000387382 68 ntBASIC6.71□□□□□ -1.34
USB1Q9BQ65 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.71□□□□□ -1.34
USB1Q9BQ65 RNU2-38P-201ENST00000410856 79 ntBASIC6.71□□□□□ -1.34
USB1Q9BQ65 OR6E1P-201ENST00000414424 923 ntBASIC6.71□□□□□ -1.34
USB1Q9BQ65 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
USB1Q9BQ65 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC6.71□□□□□ -1.34
USB1Q9BQ65 USMG5P1-201ENST00000425964 177 ntBASIC6.71□□□□□ -1.34
USB1Q9BQ65 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC6.71□□□□□ -1.34
USB1Q9BQ65 RPL36AP6-201ENST00000435770 321 ntBASIC6.71□□□□□ -1.34
USB1Q9BQ65 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.71□□□□□ -1.34
USB1Q9BQ65 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC6.71□□□□□ -1.34
USB1Q9BQ65 AL353752.1-201ENST00000454946 260 ntBASIC6.71□□□□□ -1.34
USB1Q9BQ65 AC004692.1-201ENST00000455430 424 ntBASIC6.71□□□□□ -1.34
USB1Q9BQ65 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.71□□□□□ -1.34
USB1Q9BQ65 RN7SL870P-201ENST00000460111 296 ntBASIC6.71□□□□□ -1.34
USB1Q9BQ65 AP001992.1-205ENST00000462248 379 ntBASIC6.71□□□□□ -1.34
USB1Q9BQ65 RPS3AP41-201ENST00000462701 778 ntBASIC6.71□□□□□ -1.34
USB1Q9BQ65 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC6.71□□□□□ -1.34
USB1Q9BQ65 RN7SL282P-201ENST00000479676 297 ntBASIC6.71□□□□□ -1.34
USB1Q9BQ65 AC022215.1-201ENST00000481770 362 ntBASIC6.71□□□□□ -1.34
USB1Q9BQ65 ATP5LP5-201ENST00000483050 299 ntBASIC6.71□□□□□ -1.34
USB1Q9BQ65 MTND6P8-201ENST00000503471 522 ntBASIC6.71□□□□□ -1.34
USB1Q9BQ65 AC233724.1-201ENST00000503894 233 ntBASIC6.71□□□□□ -1.34
USB1Q9BQ65 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC6.71□□□□□ -1.34
USB1Q9BQ65 AC021146.3-201ENST00000511911 260 ntBASIC6.71□□□□□ -1.34
USB1Q9BQ65 RNU6-138P-201ENST00000515952 107 ntBASIC6.71□□□□□ -1.34
USB1Q9BQ65 SCARNA16.2-201ENST00000516520 172 ntBASIC6.71□□□□□ -1.34
USB1Q9BQ65 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC6.71□□□□□ -1.34
USB1Q9BQ65 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
USB1Q9BQ65 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC6.71□□□□□ -1.34
USB1Q9BQ65 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms