Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 DEFB109D-201ENST00000529497 240 ntBASIC4.41□□□□□ -1.7
RPRD1AQ96P16 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.41□□□□□ -1.7
RPRD1AQ96P16 AC006064.5-201ENST00000541782 248 ntBASIC4.41□□□□□ -1.7
RPRD1AQ96P16 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.41□□□□□ -1.7
RPRD1AQ96P16 AL109766.1-201ENST00000555080 552 ntBASIC4.41□□□□□ -1.7
RPRD1AQ96P16 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.41□□□□□ -1.7
RPRD1AQ96P16 MIR4716-201ENST00000579628 84 ntBASIC4.41□□□□□ -1.7
RPRD1AQ96P16 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.41□□□□□ -1.7
RPRD1AQ96P16 AC069366.1-201ENST00000583159 838 ntBASIC4.41□□□□□ -1.7
RPRD1AQ96P16 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RPRD1AQ96P16 AC067852.7-201ENST00000623270 535 ntBASIC4.41□□□□□ -1.7
RPRD1AQ96P16 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RPRD1AQ96P16 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.41□□□□□ -1.7
RPRD1AQ96P16 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RPRD1AQ96P16 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RPRD1AQ96P16 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
RPRD1AQ96P16 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RPRD1AQ96P16 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.4□□□□□ -1.7
RPRD1AQ96P16 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.7
RPRD1AQ96P16 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RPRD1AQ96P16 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
RPRD1AQ96P16 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RPRD1AQ96P16 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RPRD1AQ96P16 MIR448-201ENST00000362131 111 ntBASIC4.4□□□□□ -1.71
RPRD1AQ96P16 RNU6-532P-201ENST00000384318 107 ntBASIC4.4□□□□□ -1.71
RPRD1AQ96P16 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.4□□□□□ -1.71
RPRD1AQ96P16 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.4□□□□□ -1.71
RPRD1AQ96P16 BTF3P9-201ENST00000418784 283 ntBASIC4.4□□□□□ -1.71
RPRD1AQ96P16 AC004448.2-201ENST00000422360 586 ntBASIC4.4□□□□□ -1.71
RPRD1AQ96P16 AC073335.1-201ENST00000427776 363 ntBASIC4.4□□□□□ -1.71
RPRD1AQ96P16 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RPRD1AQ96P16 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.4□□□□□ -1.71
RPRD1AQ96P16 AL606490.8-201ENST00000441624 319 ntBASIC4.4□□□□□ -1.71
RPRD1AQ96P16 EEF1A1P1-201ENST00000447052 739 ntBASIC4.4□□□□□ -1.71
RPRD1AQ96P16 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.4□□□□□ -1.71
RPRD1AQ96P16 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.4□□□□□ -1.71
RPRD1AQ96P16 RNU6-1218P-201ENST00000458990 108 ntBASIC4.4□□□□□ -1.71
RPRD1AQ96P16 RN7SL817P-201ENST00000480777 288 ntBASIC4.4□□□□□ -1.71
RPRD1AQ96P16 OR52A4P-203ENST00000498233 1014 ntBASIC4.4□□□□□ -1.71
RPRD1AQ96P16 AC010627.1-201ENST00000503819 1294 ntBASIC4.4□□□□□ -1.71
RPRD1AQ96P16 PCNAP1-201ENST00000505363 709 ntBASIC4.4□□□□□ -1.71
RPRD1AQ96P16 KCTD9P2-201ENST00000512203 1013 ntBASIC4.4□□□□□ -1.71
RPRD1AQ96P16 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RPRD1AQ96P16 SNORA31.9-201ENST00000516429 84 ntBASIC4.4□□□□□ -1.71
RPRD1AQ96P16 RNU6-551P-201ENST00000516661 103 ntBASIC4.4□□□□□ -1.71
RPRD1AQ96P16 SMARCE1P4-201ENST00000523647 241 ntBASIC4.4□□□□□ -1.71
RPRD1AQ96P16 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.4□□□□□ -1.71
RPRD1AQ96P16 OR4V1P-201ENST00000525394 1140 ntBASIC4.4□□□□□ -1.71
RPRD1AQ96P16 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.4□□□□□ -1.71
RPRD1AQ96P16 PHBP17-201ENST00000528576 541 ntBASIC4.4□□□□□ -1.71
RPRD1AQ96P16 CYCSP29-201ENST00000533731 318 ntBASIC4.4□□□□□ -1.71
RPRD1AQ96P16 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
RPRD1AQ96P16 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
RPRD1AQ96P16 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.4□□□□□ -1.71
RPRD1AQ96P16 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.4□□□□□ -1.71
RPRD1AQ96P16 PARP1P2-201ENST00000556806 195 ntBASIC4.4□□□□□ -1.71
RPRD1AQ96P16 MIR4697-201ENST00000582977 78 ntBASIC4.4□□□□□ -1.71
RPRD1AQ96P16 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.4□□□□□ -1.71
RPRD1AQ96P16 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.4□□□□□ -1.71
RPRD1AQ96P16 AC025946.2-201ENST00000603398 234 ntBASIC4.4□□□□□ -1.71
RPRD1AQ96P16 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.4□□□□□ -1.71
RPRD1AQ96P16 FAM27D1-201ENST00000612308 341 ntBASIC4.4□□□□□ -1.71
RPRD1AQ96P16 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.4□□□□□ -1.71
RPRD1AQ96P16 AL445567.2-201ENST00000618935 498 ntBASIC4.4□□□□□ -1.71
RPRD1AQ96P16 AC019278.1-201ENST00000623516 479 ntBASIC4.4□□□□□ -1.71
RPRD1AQ96P16 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RPRD1AQ96P16 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.4□□□□□ -1.71
RPRD1AQ96P16 OR52H1-202ENST00000641796 1061 ntBASIC4.4□□□□□ -1.71
RPRD1AQ96P16 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
RPRD1AQ96P16 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RPRD1AQ96P16 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.4□□□□□ -1.71
RPRD1AQ96P16 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.4□□□□□ -1.71
RPRD1AQ96P16 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
RPRD1AQ96P16 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RPRD1AQ96P16 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
RPRD1AQ96P16 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RPRD1AQ96P16 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.39□□□□□ -1.71
RPRD1AQ96P16 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
RPRD1AQ96P16 SNORA70.2-201ENST00000364506 135 ntBASIC4.39□□□□□ -1.71
RPRD1AQ96P16 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.39□□□□□ -1.71
RPRD1AQ96P16 RNU6-1279P-201ENST00000383917 103 ntBASIC4.39□□□□□ -1.71
RPRD1AQ96P16 MIR7-1-201ENST00000384871 110 ntBASIC4.39□□□□□ -1.71
RPRD1AQ96P16 MIR320B1-201ENST00000390209 79 ntBASIC4.39□□□□□ -1.71
RPRD1AQ96P16 AL161909.1-201ENST00000397390 712 ntBASIC4.39□□□□□ -1.71
RPRD1AQ96P16 AL161631.1-201ENST00000417933 486 ntBASIC4.39□□□□□ -1.71
RPRD1AQ96P16 AC048351.1-201ENST00000420064 602 ntBASIC4.39□□□□□ -1.71
RPRD1AQ96P16 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.39□□□□□ -1.71
RPRD1AQ96P16 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.39□□□□□ -1.71
RPRD1AQ96P16 ABCF2P2-201ENST00000450549 296 ntBASIC4.39□□□□□ -1.71
RPRD1AQ96P16 AC005008.1-201ENST00000456151 612 ntBASIC4.39□□□□□ -1.71
RPRD1AQ96P16 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.39□□□□□ -1.71
RPRD1AQ96P16 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.39□□□□□ -1.71
RPRD1AQ96P16 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.39□□□□□ -1.71
RPRD1AQ96P16 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.39□□□□□ -1.71
RPRD1AQ96P16 RNA5SP73-201ENST00000516744 108 ntBASIC4.39□□□□□ -1.71
RPRD1AQ96P16 MRPL49P2-201ENST00000521066 465 ntBASIC4.39□□□□□ -1.71
RPRD1AQ96P16 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.39□□□□□ -1.71
RPRD1AQ96P16 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.39□□□□□ -1.71
RPRD1AQ96P16 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RPRD1AQ96P16 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms