Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 AC092490.3-201ENST00000545370 572 ntBASIC4.51□□□□□ -1.69
VPS33AQ96AX1 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 AC091979.2-201ENST00000607514 214 ntBASIC4.51□□□□□ -1.69
VPS33AQ96AX1 AC007497.1-201ENST00000610421 561 ntBASIC4.51□□□□□ -1.69
VPS33AQ96AX1 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 LINC01739-205ENST00000641890 573 ntBASIC4.51□□□□□ -1.69
VPS33AQ96AX1 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 AC068254.2-201ENST00000623938 3577 ntBASIC4.51□□□□□ -1.69
VPS33AQ96AX1 SAGE4P-201ENST00000442271 3381 ntBASIC4.51□□□□□ -1.69
VPS33AQ96AX1 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS33AQ96AX1 DCAF13P3-201ENST00000561147 1334 ntBASIC4.5□□□□□ -1.69
VPS33AQ96AX1 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS33AQ96AX1 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
VPS33AQ96AX1 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VPS33AQ96AX1 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS33AQ96AX1 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS33AQ96AX1 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
VPS33AQ96AX1 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS33AQ96AX1 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
VPS33AQ96AX1 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.5□□□□□ -1.69
VPS33AQ96AX1 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS33AQ96AX1 MIR708-201ENST00000390708 88 ntBASIC4.5□□□□□ -1.69
VPS33AQ96AX1 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.5□□□□□ -1.69
VPS33AQ96AX1 RNU2-21P-201ENST00000410368 188 ntBASIC4.5□□□□□ -1.69
VPS33AQ96AX1 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.5□□□□□ -1.69
VPS33AQ96AX1 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.5□□□□□ -1.69
VPS33AQ96AX1 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.5□□□□□ -1.69
VPS33AQ96AX1 EIF4EP1-201ENST00000422311 642 ntBASIC4.5□□□□□ -1.69
VPS33AQ96AX1 PDSS1P1-201ENST00000422953 1114 ntBASIC4.5□□□□□ -1.69
VPS33AQ96AX1 AC005033.1-201ENST00000428904 813 ntBASIC4.5□□□□□ -1.69
VPS33AQ96AX1 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.5□□□□□ -1.69
VPS33AQ96AX1 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.5□□□□□ -1.69
VPS33AQ96AX1 HMGN1P5-201ENST00000448591 263 ntBASIC4.5□□□□□ -1.69
VPS33AQ96AX1 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.5□□□□□ -1.69
VPS33AQ96AX1 RPL5P30-201ENST00000465511 891 ntBASIC4.5□□□□□ -1.69
VPS33AQ96AX1 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.5□□□□□ -1.69
VPS33AQ96AX1 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VPS33AQ96AX1 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VPS33AQ96AX1 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.5□□□□□ -1.69
VPS33AQ96AX1 AC004980.4-201ENST00000513375 203 ntBASIC4.5□□□□□ -1.69
VPS33AQ96AX1 RNU6-416P-201ENST00000516265 103 ntBASIC4.5□□□□□ -1.69
VPS33AQ96AX1 DEFB109D-201ENST00000529497 240 ntBASIC4.5□□□□□ -1.69
VPS33AQ96AX1 AC004825.1-201ENST00000555068 586 ntBASIC4.5□□□□□ -1.69
VPS33AQ96AX1 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.5□□□□□ -1.69
VPS33AQ96AX1 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.5□□□□□ -1.69
VPS33AQ96AX1 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.5□□□□□ -1.69
VPS33AQ96AX1 AC017100.2-201ENST00000584628 355 ntBASIC4.5□□□□□ -1.69
VPS33AQ96AX1 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS33AQ96AX1 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS33AQ96AX1 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS33AQ96AX1 AP003117.2-201ENST00000606010 545 ntBASIC4.5□□□□□ -1.69
VPS33AQ96AX1 AL138960.2-201ENST00000625145 535 ntBASIC4.5□□□□□ -1.69
VPS33AQ96AX1 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.5□□□□□ -1.69
VPS33AQ96AX1 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.5□□□□□ -1.69
VPS33AQ96AX1 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS33AQ96AX1 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS33AQ96AX1 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS33AQ96AX1 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.5□□□□□ -1.69
VPS33AQ96AX1 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS33AQ96AX1 AL355852.1-201ENST00000454081 1771 ntBASIC4.5□□□□□ -1.69
VPS33AQ96AX1 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS33AQ96AX1 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS33AQ96AX1 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS33AQ96AX1 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 IRF5P1-201ENST00000504852 2164 ntBASIC4.49□□□□□ -1.69
VPS33AQ96AX1 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 RNU6-1279P-201ENST00000383917 103 ntBASIC4.49□□□□□ -1.69
VPS33AQ96AX1 RNU1-82P-201ENST00000390851 165 ntBASIC4.49□□□□□ -1.69
VPS33AQ96AX1 AL590762.2-201ENST00000395798 571 ntBASIC4.49□□□□□ -1.69
VPS33AQ96AX1 GLULP6-201ENST00000399502 913 ntBASIC4.49□□□□□ -1.69
VPS33AQ96AX1 RN7SKP273-201ENST00000411392 314 ntBASIC4.49□□□□□ -1.69
VPS33AQ96AX1 AP000534.2-201ENST00000412729 568 ntBASIC4.49□□□□□ -1.69
VPS33AQ96AX1 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms