Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC7.11□□□□□ -1.27
HLA-CQ95604 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC7.11□□□□□ -1.27
HLA-CQ95604 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HLA-CQ95604 ULK4P1-202ENST00000565174 503 ntBASIC7.11□□□□□ -1.27
HLA-CQ95604 MIR4775-201ENST00000581168 75 ntBASIC7.11□□□□□ -1.27
HLA-CQ95604 AC026898.1-201ENST00000586404 571 ntBASIC7.11□□□□□ -1.27
HLA-CQ95604 AC011477.5-201ENST00000586571 259 ntBASIC7.11□□□□□ -1.27
HLA-CQ95604 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC7.11□□□□□ -1.27
HLA-CQ95604 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC7.11□□□□□ -1.27
HLA-CQ95604 AL512624.1-201ENST00000613638 469 ntBASIC7.11□□□□□ -1.27
HLA-CQ95604 PLCE1P1-201ENST00000622094 305 ntBASIC7.11□□□□□ -1.27
HLA-CQ95604 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
HLA-CQ95604 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HLA-CQ95604 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC7.11□□□□□ -1.27
HLA-CQ95604 PHF2P2-202ENST00000444553 2865 ntBASIC7.11□□□□□ -1.27
HLA-CQ95604 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
HLA-CQ95604 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
HLA-CQ95604 AC097714.1-201ENST00000511272 1647 ntBASIC7.11□□□□□ -1.27
HLA-CQ95604 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HLA-CQ95604 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.11□□□□□ -1.27
HLA-CQ95604 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HLA-CQ95604 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC7.11□□□□□ -1.27
HLA-CQ95604 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HLA-CQ95604 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
HLA-CQ95604 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
HLA-CQ95604 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC7.11□□□□□ -1.27
HLA-CQ95604 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HLA-CQ95604 USP44-208ENST00000552440 1818 ntTSL 5 BASIC7.11□□□□□ -1.27
HLA-CQ95604 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.1□□□□□ -1.27
HLA-CQ95604 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HLA-CQ95604 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.1□□□□□ -1.27
HLA-CQ95604 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC7.1□□□□□ -1.27
HLA-CQ95604 WAC-209ENST00000428935 1320 ntTSL 2 BASIC7.1□□□□□ -1.27
HLA-CQ95604 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC7.1□□□□□ -1.27
HLA-CQ95604 AC000099.1-202ENST00000413812 1912 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HLA-CQ95604 Y_RNA.22-201ENST00000362492 102 ntBASIC7.1□□□□□ -1.27
HLA-CQ95604 AC017035.1-201ENST00000411999 1115 ntBASIC7.1□□□□□ -1.27
HLA-CQ95604 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.1□□□□□ -1.27
HLA-CQ95604 RPL34P19-201ENST00000415903 342 ntBASIC7.1□□□□□ -1.27
HLA-CQ95604 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC7.1□□□□□ -1.27
HLA-CQ95604 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC7.1□□□□□ -1.27
HLA-CQ95604 RPL7L1P10-201ENST00000427790 463 ntBASIC7.1□□□□□ -1.27
HLA-CQ95604 AL160004.2-201ENST00000432935 350 ntBASIC7.1□□□□□ -1.27
HLA-CQ95604 AC012075.1-201ENST00000436549 580 ntBASIC7.1□□□□□ -1.27
HLA-CQ95604 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC7.1□□□□□ -1.27
HLA-CQ95604 AL049714.1-201ENST00000466686 347 ntBASIC7.1□□□□□ -1.27
HLA-CQ95604 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC7.1□□□□□ -1.27
HLA-CQ95604 RPS27P27-201ENST00000498779 255 ntBASIC7.1□□□□□ -1.27
HLA-CQ95604 LSM3P4-201ENST00000502948 309 ntBASIC7.1□□□□□ -1.27
HLA-CQ95604 Y_RNA.668-201ENST00000516233 93 ntBASIC7.1□□□□□ -1.27
HLA-CQ95604 MYL12AP1-201ENST00000518490 515 ntBASIC7.1□□□□□ -1.27
HLA-CQ95604 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC7.1□□□□□ -1.27
HLA-CQ95604 MTND4P7-201ENST00000523876 130 ntBASIC7.1□□□□□ -1.27
HLA-CQ95604 PTP4A1P6-201ENST00000531034 478 ntBASIC7.1□□□□□ -1.27
HLA-CQ95604 AC026956.1-201ENST00000558741 396 ntBASIC7.1□□□□□ -1.27
HLA-CQ95604 CYCSP38-201ENST00000559840 322 ntBASIC7.1□□□□□ -1.27
HLA-CQ95604 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC7.1□□□□□ -1.27
HLA-CQ95604 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC7.1□□□□□ -1.27
HLA-CQ95604 AC073488.6-201ENST00000632293 754 ntBASIC7.1□□□□□ -1.27
HLA-CQ95604 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC7.1□□□□□ -1.27
HLA-CQ95604 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HLA-CQ95604 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.1□□□□□ -1.27
HLA-CQ95604 AC011632.1-202ENST00000518128 2810 ntTSL 2 BASIC7.1□□□□□ -1.27
HLA-CQ95604 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.1□□□□□ -1.27
HLA-CQ95604 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC7.1□□□□□ -1.27
HLA-CQ95604 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HLA-CQ95604 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC7.1□□□□□ -1.27
HLA-CQ95604 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HLA-CQ95604 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
HLA-CQ95604 IL31RA-205ENST00000396836 2426 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HLA-CQ95604 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HLA-CQ95604 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.1□□□□□ -1.27
HLA-CQ95604 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HLA-CQ95604 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.1□□□□□ -1.27
HLA-CQ95604 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HLA-CQ95604 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HLA-CQ95604 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC7.09□□□□□ -1.27
HLA-CQ95604 PRICKLE2-AS3-201ENST00000473434 2496 ntTSL 2 BASIC7.09□□□□□ -1.27
HLA-CQ95604 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC7.09□□□□□ -1.27
HLA-CQ95604 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
HLA-CQ95604 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
HLA-CQ95604 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC7.09□□□□□ -1.27
HLA-CQ95604 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HLA-CQ95604 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HLA-CQ95604 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
HLA-CQ95604 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HLA-CQ95604 RNU6-28P-201ENST00000362378 107 ntBASIC7.09□□□□□ -1.27
HLA-CQ95604 Y_RNA.167-201ENST00000363735 109 ntBASIC7.09□□□□□ -1.27
HLA-CQ95604 Y_RNA.455-201ENST00000384230 98 ntBASIC7.09□□□□□ -1.27
HLA-CQ95604 Y_RNA.527-201ENST00000384573 102 ntBASIC7.09□□□□□ -1.27
HLA-CQ95604 RNU6-316P-201ENST00000391027 107 ntBASIC7.09□□□□□ -1.27
HLA-CQ95604 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HLA-CQ95604 AL023807.1-201ENST00000407932 359 ntBASIC7.09□□□□□ -1.27
HLA-CQ95604 HNRNPDLP1-201ENST00000412834 550 ntBASIC7.09□□□□□ -1.27
HLA-CQ95604 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC7.09□□□□□ -1.27
HLA-CQ95604 AL022100.1-202ENST00000421214 548 ntBASIC7.09□□□□□ -1.27
HLA-CQ95604 AC012065.2-201ENST00000421295 375 ntBASIC7.09□□□□□ -1.27
HLA-CQ95604 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.09□□□□□ -1.27
HLA-CQ95604 PNKDP1-201ENST00000435914 430 ntBASIC7.09□□□□□ -1.27
HLA-CQ95604 RPL21P23-201ENST00000446654 460 ntBASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms