Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 RNA5SP36-201ENST00000410197 133 ntBASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 RPL23AP89-201ENST00000439324 255 ntBASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 EXTL2P1-201ENST00000446218 416 ntBASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 FABP3P2-201ENST00000453169 399 ntBASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 AL513533.1-201ENST00000453728 415 ntBASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 PARP4P3-201ENST00000510265 317 ntBASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 AC020915.5-201ENST00000596836 964 ntBASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 BMS1P7-201ENST00000602440 1052 ntBASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 AL049634.3-201ENST00000604968 457 ntBASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 AC140479.6-201ENST00000633535 357 ntBASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 AC119674.1-212ENST00000641155 993 ntBASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 LINC02471-203ENST00000641941 4752 ntBASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 EXOC5P1-201ENST00000510543 1969 ntBASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 AL607077.1-201ENST00000401718 499 ntBASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 SNORA11F-201ENST00000408237 128 ntBASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 AC013404.1-201ENST00000413068 249 ntBASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 ELOCP18-201ENST00000434209 337 ntBASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 RPL7P28-201ENST00000437739 740 ntBASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 RPL7P32-201ENST00000457119 744 ntBASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 RN7SL98P-201ENST00000462271 300 ntBASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 RPL23AP12-201ENST00000467573 473 ntBASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 RN7SL585P-201ENST00000470538 280 ntBASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 AC006517.1-201ENST00000480485 328 ntBASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 AC231760.1-201ENST00000498002 260 ntBASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 AC017037.1-201ENST00000508460 471 ntBASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 RNA5SP519-201ENST00000516480 119 ntBASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 RN7SKP92-201ENST00000517266 244 ntBASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 OR5M7P-201ENST00000526140 972 ntBASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 AC243654.2-201ENST00000612843 443 ntBASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 AL589935.2-201ENST00000616471 1231 ntBASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 AC095038.2-201ENST00000621464 1070 ntBASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 AC116563.2-201ENST00000624751 535 ntBASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 AC106871.1-201ENST00000568324 3102 ntBASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.03□□□□□ -1.76
CLHC1Q8NHS4 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 RNU6-398P-201ENST00000384143 109 ntBASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 MIR1179-201ENST00000408703 91 ntBASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 AC119751.6-201ENST00000416712 186 ntBASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 AC093698.1-201ENST00000423843 571 ntBASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 AL157831.1-201ENST00000426134 473 ntBASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 BX119904.1-201ENST00000432026 348 ntBASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 AL132765.1-201ENST00000434165 553 ntBASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 SERPINA7P1-201ENST00000443077 631 ntBASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 SBDSP1-204ENST00000453858 737 ntBASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 SNORD108-201ENST00000459332 71 ntBASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 AF213884.1-201ENST00000488102 463 ntBASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 AC068305.1-201ENST00000497406 726 ntBASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 AK3P4-201ENST00000504283 583 ntBASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.02□□□□□ -1.77
CLHC1Q8NHS4 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms