Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PHC3Q8NDX5 AC022325.1-201ENST00000502748 2199 ntBASIC6.14□□□□□ -1.43
PHC3Q8NDX5 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
PHC3Q8NDX5 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PHC3Q8NDX5 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.14□□□□□ -1.43
PHC3Q8NDX5 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PHC3Q8NDX5 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
PHC3Q8NDX5 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PHC3Q8NDX5 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 OR11H4-201ENST00000315409 1082 ntBASIC6.13□□□□□ -1.43
PHC3Q8NDX5 RNY4P14-201ENST00000363656 96 ntBASIC6.13□□□□□ -1.43
PHC3Q8NDX5 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 Y_RNA.402-201ENST00000383972 102 ntBASIC6.13□□□□□ -1.43
PHC3Q8NDX5 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 RPS3AP36-201ENST00000398190 775 ntBASIC6.13□□□□□ -1.43
PHC3Q8NDX5 HMGB1P17-201ENST00000403495 628 ntBASIC6.13□□□□□ -1.43
PHC3Q8NDX5 MIR1275-201ENST00000408770 80 ntBASIC6.13□□□□□ -1.43
PHC3Q8NDX5 RN7SKP266-201ENST00000410232 287 ntBASIC6.13□□□□□ -1.43
PHC3Q8NDX5 RNA5SP198-201ENST00000410376 127 ntBASIC6.13□□□□□ -1.43
PHC3Q8NDX5 COX6CP17-201ENST00000421389 185 ntBASIC6.13□□□□□ -1.43
PHC3Q8NDX5 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 RPL7P11-201ENST00000437586 658 ntBASIC6.13□□□□□ -1.43
PHC3Q8NDX5 MTND6P13-201ENST00000443510 523 ntBASIC6.13□□□□□ -1.43
PHC3Q8NDX5 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 AC114728.1-201ENST00000488289 483 ntBASIC6.13□□□□□ -1.43
PHC3Q8NDX5 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 AC018442.3-201ENST00000523025 183 ntBASIC6.13□□□□□ -1.43
PHC3Q8NDX5 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 AP001893.2-201ENST00000526949 202 ntBASIC6.13□□□□□ -1.43
PHC3Q8NDX5 OR5AQ1P-201ENST00000527596 927 ntBASIC6.13□□□□□ -1.43
PHC3Q8NDX5 RPA2P3-201ENST00000533268 770 ntBASIC6.13□□□□□ -1.43
PHC3Q8NDX5 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 RPL21P5-201ENST00000554662 472 ntBASIC6.13□□□□□ -1.43
PHC3Q8NDX5 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 MIR4675-201ENST00000577898 77 ntBASIC6.13□□□□□ -1.43
PHC3Q8NDX5 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 AC091965.4-201ENST00000607691 587 ntBASIC6.13□□□□□ -1.43
PHC3Q8NDX5 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 AC104010.1-201ENST00000616889 150 ntBASIC6.13□□□□□ -1.43
PHC3Q8NDX5 AC002553.4-201ENST00000616896 331 ntBASIC6.13□□□□□ -1.43
PHC3Q8NDX5 AC110994.2-201ENST00000635481 492 ntBASIC6.13□□□□□ -1.43
PHC3Q8NDX5 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.13□□□□□ -1.43
PHC3Q8NDX5 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 OR11H5P-202ENST00000641612 1325 ntBASIC6.13□□□□□ -1.43
PHC3Q8NDX5 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 ADAM24P-201ENST00000398655 2101 ntBASIC6.13□□□□□ -1.43
PHC3Q8NDX5 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
PHC3Q8NDX5 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PHC3Q8NDX5 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PHC3Q8NDX5 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.12□□□□□ -1.43
PHC3Q8NDX5 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
PHC3Q8NDX5 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.12□□□□□ -1.43
PHC3Q8NDX5 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PHC3Q8NDX5 Y_RNA.11-201ENST00000362375 109 ntBASIC6.12□□□□□ -1.43
PHC3Q8NDX5 Y_RNA.70-201ENST00000362886 110 ntBASIC6.12□□□□□ -1.43
PHC3Q8NDX5 RN7SKP81-201ENST00000365603 331 ntBASIC6.12□□□□□ -1.43
PHC3Q8NDX5 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC6.12□□□□□ -1.43
PHC3Q8NDX5 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PHC3Q8NDX5 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PHC3Q8NDX5 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
PHC3Q8NDX5 PRRC2CP1-201ENST00000404428 159 ntBASIC6.12□□□□□ -1.43
PHC3Q8NDX5 AC099535.1-201ENST00000408928 371 ntBASIC6.12□□□□□ -1.43
PHC3Q8NDX5 AL035422.1-201ENST00000414193 397 ntBASIC6.12□□□□□ -1.43
PHC3Q8NDX5 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PHC3Q8NDX5 AL354868.1-201ENST00000417077 482 ntBASIC6.12□□□□□ -1.43
PHC3Q8NDX5 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PHC3Q8NDX5 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.12□□□□□ -1.43
PHC3Q8NDX5 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC6.12□□□□□ -1.43
PHC3Q8NDX5 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
PHC3Q8NDX5 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC6.12□□□□□ -1.43
PHC3Q8NDX5 RPL37P1-201ENST00000432310 284 ntBASIC6.12□□□□□ -1.43
PHC3Q8NDX5 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC6.12□□□□□ -1.43
PHC3Q8NDX5 ANKRD62P1-201ENST00000434304 1623 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms