Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AC019226.2-201ENST00000625973 424 ntBASIC5.3□□□□□ -1.56
CCDC33Q8N5R6 ZNF876P-202ENST00000398732 1485 ntBASIC5.3□□□□□ -1.56
CCDC33Q8N5R6 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.3□□□□□ -1.56
CCDC33Q8N5R6 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC33Q8N5R6 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC33Q8N5R6 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC33Q8N5R6 AL731532.2-201ENST00000623542 1953 ntBASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 AC006210.2-201ENST00000367074 1545 ntBASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 AC012618.3-205ENST00000637896 1496 ntBASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 AC017079.1-201ENST00000333650 415 ntBASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 AL390316.1-201ENST00000406279 553 ntBASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 U3.32-201ENST00000408116 212 ntBASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 AC107081.1-201ENST00000414975 361 ntBASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 PAICSP7-201ENST00000419829 962 ntBASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 AC009965.2-201ENST00000425328 970 ntBASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 BX323845.1-201ENST00000432417 179 ntBASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 RHOT1P3-201ENST00000436571 331 ntBASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 MTCO2P20-201ENST00000437339 673 ntBASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 MTCYBP31-201ENST00000438855 1122 ntBASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 USP9YP25-201ENST00000457708 443 ntBASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 RPS4XP12-201ENST00000461747 709 ntBASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 RPL7P16-201ENST00000479738 738 ntBASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 MTND2P38-201ENST00000522536 667 ntBASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 AC079075.1-201ENST00000559543 878 ntBASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 PCNAP1-202ENST00000595299 752 ntBASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 NIFKP6-201ENST00000598115 845 ntBASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 uc_338.18-201ENST00000615451 175 ntBASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 AC015804.1-201ENST00000622935 435 ntBASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 AC135068.12-201ENST00000637370 931 ntBASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 Z95331.1-201ENST00000623075 23112 ntBASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.29□□□□□ -1.56
CCDC33Q8N5R6 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 AL022322.2-201ENST00000624072 20397 ntBASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 AL118496.1-201ENST00000440201 1812 ntBASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 HMGB1P5-201ENST00000255320 642 ntBASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 AL078599.1-201ENST00000402075 293 ntBASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 AL590084.1-201ENST00000407885 387 ntBASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 MIR1182-201ENST00000408363 97 ntBASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 AC008072.1-201ENST00000434254 824 ntBASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 RPL7L1P1-201ENST00000448259 785 ntBASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 RPS29P33-201ENST00000456717 146 ntBASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 AC011979.1-201ENST00000472300 483 ntBASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 AC091951.3-201ENST00000504093 246 ntBASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 AC097173.1-201ENST00000505862 819 ntBASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 AC034244.1-201ENST00000507687 207 ntBASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 TCP11X3P-202ENST00000514289 1254 ntBASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC33Q8N5R6 HIGD1AP6-201ENST00000521833 279 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms