Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 HIGD1AP14-201ENST00000507617 282 ntBASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 NARSP2-201ENST00000518524 679 ntBASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 AC023157.2-201ENST00000540596 141 ntBASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 BNIP3P6-201ENST00000549284 499 ntBASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 FXNP1-201ENST00000555153 337 ntBASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 AC023968.1-201ENST00000560719 475 ntBASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 AC005839.1-201ENST00000624148 3213 ntBASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 TATDN2P3-201ENST00000452855 3665 ntBASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 AP004289.2-201ENST00000444413 1457 ntBASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.79□□□□□ -1.32
NPAS3Q8IXF0 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 RNU6-1120P-201ENST00000362988 108 ntBASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 RNU6-1300P-201ENST00000391046 108 ntBASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 SAR1AP2-201ENST00000392696 594 ntBASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 AC008171.1-201ENST00000395058 200 ntBASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 AL359634.1-202ENST00000404721 284 ntBASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 AL451074.5-201ENST00000415894 435 ntBASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 BTF3P9-201ENST00000418784 283 ntBASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 AC018865.2-201ENST00000423631 129 ntBASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 FABP7P2-201ENST00000429946 379 ntBASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 RPL34P6-201ENST00000432390 345 ntBASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 PNKDP1-201ENST00000435914 430 ntBASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 AL645936.1-201ENST00000441979 518 ntBASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 RNU6-1132P-201ENST00000459214 107 ntBASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 AC018638.3-201ENST00000461273 132 ntBASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 RN7SL221P-201ENST00000466190 281 ntBASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 AC139272.1-201ENST00000505516 640 ntBASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 AC131392.1-201ENST00000506490 633 ntBASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 COX6B1P4-201ENST00000519826 484 ntBASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 AC090312.2-201ENST00000582687 378 ntBASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 BNIP3P4-201ENST00000604946 565 ntBASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 AL096712.1-201ENST00000614561 159 ntBASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 AC015967.1-201ENST00000619893 476 ntBASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
NPAS3Q8IXF0 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
NPAS3Q8IXF0 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
NPAS3Q8IXF0 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.32
NPAS3Q8IXF0 AC132825.1-201ENST00000463573 2247 ntBASIC6.77□□□□□ -1.33
NPAS3Q8IXF0 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms