Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 RN7SKP56-201ENST00000410513 331 ntBASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 PGBD4P8-201ENST00000412993 562 ntBASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 AL512504.1-201ENST00000415494 778 ntBASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 AL391219.1-201ENST00000422570 483 ntBASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 AL157831.1-201ENST00000426134 473 ntBASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 AC087650.1-201ENST00000431445 468 ntBASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 NDUFA5P10-201ENST00000432147 357 ntBASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 MTCO1P57-201ENST00000432182 261 ntBASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 AL606490.7-201ENST00000433136 191 ntBASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 FTH1P16-201ENST00000435241 552 ntBASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 NDUFA5P12-201ENST00000503796 343 ntBASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 HIGD1AP18-201ENST00000520730 278 ntBASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 BRD9P1-201ENST00000529855 560 ntBASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 AC084783.1-201ENST00000565846 910 ntBASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 MTATP6P25-201ENST00000574491 261 ntBASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 AC008782.1-201ENST00000603386 430 ntBASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 AP004372.1-201ENST00000604842 844 ntBASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 AC084036.1-201ENST00000609190 508 ntBASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 AP000255.1-201ENST00000610276 676 ntBASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 AL445528.2-201ENST00000620582 470 ntBASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 AC017007.4-201ENST00000503353 1352 ntBASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 PNPT1P2-201ENST00000456768 2050 ntBASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 RAD17P1-201ENST00000418130 2042 ntBASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 RNU6-31P-201ENST00000384388 108 ntBASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 AL035696.2-201ENST00000407941 709 ntBASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 FTH1P6-201ENST00000430768 320 ntBASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 RPL23AP52-201ENST00000439311 478 ntBASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 VN1R25P-201ENST00000443385 738 ntBASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 AL157827.1-201ENST00000447622 132 ntBASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 VN1R40P-201ENST00000455196 941 ntBASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 AP002345.1-201ENST00000456493 928 ntBASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 S100A11P1-201ENST00000477525 312 ntBASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 AC083982.1-201ENST00000485679 344 ntBASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 AC079171.1-201ENST00000568788 914 ntBASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 AC245128.3-201ENST00000594721 748 ntBASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 AC020914.4-201ENST00000597690 277 ntBASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 AC115286.1-201ENST00000604298 434 ntBASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 AC113403.1-201ENST00000604910 193 ntBASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 AC140479.6-201ENST00000633535 357 ntBASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 CFTRP2-201ENST00000634304 199 ntBASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 AC119674.1-212ENST00000641155 993 ntBASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 AL031985.3-201ENST00000565390 2449 ntBASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 BDP1P-201ENST00000582658 1990 ntBASIC4.11□□□□□ -1.75
NUDCD3Q8IVD9 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms