Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.08□□□□□ -1.6
LYSMD2Q8IV50 HTR1DP1-201ENST00000616500 888 ntBASIC5.08□□□□□ -1.6
LYSMD2Q8IV50 AC048341.3-201ENST00000619323 491 ntBASIC5.08□□□□□ -1.6
LYSMD2Q8IV50 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LYSMD2Q8IV50 AC024884.1-201ENST00000620583 399 ntBASIC5.08□□□□□ -1.6
LYSMD2Q8IV50 AL603839.4-201ENST00000624658 1005 ntBASIC5.08□□□□□ -1.6
LYSMD2Q8IV50 CRYM-AS1-204ENST00000637983 556 ntBASIC5.08□□□□□ -1.6
LYSMD2Q8IV50 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
LYSMD2Q8IV50 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.08□□□□□ -1.6
LYSMD2Q8IV50 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.08□□□□□ -1.6
LYSMD2Q8IV50 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LYSMD2Q8IV50 GVINP1-202ENST00000531871 7271 ntBASIC5.08□□□□□ -1.6
LYSMD2Q8IV50 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.08□□□□□ -1.6
LYSMD2Q8IV50 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
LYSMD2Q8IV50 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.08□□□□□ -1.6
LYSMD2Q8IV50 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LYSMD2Q8IV50 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LYSMD2Q8IV50 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 AC092681.1-201ENST00000297369 291 ntBASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 RNU1-5P-201ENST00000362684 144 ntBASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 HMGB3P23-201ENST00000414981 585 ntBASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 AC009302.1-201ENST00000417147 390 ntBASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 COX6CP17-201ENST00000421389 185 ntBASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 AC023347.2-201ENST00000433994 462 ntBASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 TUBB4BP6-201ENST00000437576 479 ntBASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 AC019185.3-201ENST00000438805 323 ntBASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 AL592114.2-201ENST00000440142 532 ntBASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 AC244505.5-201ENST00000443639 207 ntBASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 MTND4P18-201ENST00000447010 465 ntBASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 MTCO1P27-201ENST00000448269 226 ntBASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 TRBV26-201ENST00000456572 344 ntBASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 AC026410.2-201ENST00000460281 156 ntBASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 KLF3P2-201ENST00000465138 268 ntBASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 AC098976.1-201ENST00000513014 541 ntBASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 RNU6-506P-201ENST00000516553 94 ntBASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 MIR2117-201ENST00000516780 80 ntBASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 HSPA8P13-201ENST00000523715 472 ntBASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 AC013828.2-201ENST00000532487 235 ntBASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 AC093591.2-201ENST00000565254 3843 ntBASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 AC010287.1-201ENST00000566916 357 ntBASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 AC137800.2-201ENST00000574375 120 ntBASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 RN7SL290P-201ENST00000578661 300 ntBASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 AC090578.1-201ENST00000604955 591 ntBASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 SNORA74.4-201ENST00000607595 199 ntBASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 AC007684.1-201ENST00000609671 477 ntBASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 AL135999.3-201ENST00000610501 812 ntBASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 AC131902.3-201ENST00000611767 581 ntBASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 AC006453.3-201ENST00000635891 377 ntBASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 AC117529.2-201ENST00000512159 2068 ntBASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LYSMD2Q8IV50 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
LYSMD2Q8IV50 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
LYSMD2Q8IV50 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LYSMD2Q8IV50 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LYSMD2Q8IV50 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LYSMD2Q8IV50 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LYSMD2Q8IV50 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LYSMD2Q8IV50 OR11H5P-202ENST00000641612 1325 ntBASIC5.06□□□□□ -1.6
LYSMD2Q8IV50 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LYSMD2Q8IV50 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.06□□□□□ -1.6
LYSMD2Q8IV50 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
LYSMD2Q8IV50 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
LYSMD2Q8IV50 RNU105B-201ENST00000364478 208 ntBASIC5.06□□□□□ -1.6
LYSMD2Q8IV50 RNA5SP211-201ENST00000365516 117 ntBASIC5.06□□□□□ -1.6
LYSMD2Q8IV50 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC5.06□□□□□ -1.6
LYSMD2Q8IV50 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms