Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RPS26P2-201ENST00000440331 348 ntBASIC3.06□□□□□ -1.92
VPS13CQ709C8 AC011825.1-201ENST00000484967 388 ntBASIC3.06□□□□□ -1.92
VPS13CQ709C8 AC009303.3-201ENST00000591103 736 ntBASIC3.06□□□□□ -1.92
VPS13CQ709C8 AL606834.2-201ENST00000602954 668 ntBASIC3.06□□□□□ -1.92
VPS13CQ709C8 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
VPS13CQ709C8 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.06□□□□□ -1.92
VPS13CQ709C8 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
VPS13CQ709C8 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
VPS13CQ709C8 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
VPS13CQ709C8 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
VPS13CQ709C8 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
VPS13CQ709C8 AL137918.1-201ENST00000624542 1922 ntBASIC3.06□□□□□ -1.92
VPS13CQ709C8 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
VPS13CQ709C8 RNU4-35P-201ENST00000362588 141 ntBASIC3.06□□□□□ -1.92
VPS13CQ709C8 USP9YP36-201ENST00000424581 829 ntBASIC3.06□□□□□ -1.92
VPS13CQ709C8 USP9YP31-201ENST00000431405 881 ntBASIC3.06□□□□□ -1.92
VPS13CQ709C8 RNU6-237P-201ENST00000515985 71 ntBASIC3.06□□□□□ -1.92
VPS13CQ709C8 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.06□□□□□ -1.92
VPS13CQ709C8 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
VPS13CQ709C8 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
VPS13CQ709C8 AP001642.1-201ENST00000624727 2117 ntBASIC3.06□□□□□ -1.92
VPS13CQ709C8 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.06□□□□□ -1.92
VPS13CQ709C8 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
VPS13CQ709C8 GSTA8P-201ENST00000404253 637 ntBASIC3.06□□□□□ -1.92
VPS13CQ709C8 BX323014.1-201ENST00000412876 237 ntBASIC3.06□□□□□ -1.92
VPS13CQ709C8 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.06□□□□□ -1.92
VPS13CQ709C8 AC010342.1-201ENST00000514047 877 ntBASIC3.06□□□□□ -1.92
VPS13CQ709C8 RNA5SP116-201ENST00000516132 98 ntBASIC3.06□□□□□ -1.92
VPS13CQ709C8 AC008694.2-201ENST00000517591 306 ntBASIC3.06□□□□□ -1.92
VPS13CQ709C8 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.06□□□□□ -1.92
VPS13CQ709C8 EIF5A2P1-201ENST00000564027 460 ntBASIC3.06□□□□□ -1.92
VPS13CQ709C8 AC097505.1-201ENST00000610199 565 ntBASIC3.06□□□□□ -1.92
VPS13CQ709C8 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
VPS13CQ709C8 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
VPS13CQ709C8 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
VPS13CQ709C8 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
VPS13CQ709C8 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.05□□□□□ -1.92
VPS13CQ709C8 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VPS13CQ709C8 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
VPS13CQ709C8 AC005019.1-201ENST00000436455 431 ntBASIC3.05□□□□□ -1.92
VPS13CQ709C8 VN1R25P-201ENST00000443385 738 ntBASIC3.05□□□□□ -1.92
VPS13CQ709C8 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC3.05□□□□□ -1.92
VPS13CQ709C8 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.05□□□□□ -1.92
VPS13CQ709C8 SNORD105B-201ENST00000458770 79 ntBASIC3.05□□□□□ -1.92
VPS13CQ709C8 RN7SL504P-201ENST00000494496 287 ntBASIC3.05□□□□□ -1.92
VPS13CQ709C8 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VPS13CQ709C8 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.05□□□□□ -1.92
VPS13CQ709C8 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.05□□□□□ -1.92
VPS13CQ709C8 AC023509.5-201ENST00000617434 807 ntBASIC3.05□□□□□ -1.92
VPS13CQ709C8 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.05□□□□□ -1.92
VPS13CQ709C8 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
VPS13CQ709C8 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VPS13CQ709C8 AP002001.2-201ENST00000529025 1469 ntBASIC3.05□□□□□ -1.92
VPS13CQ709C8 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VPS13CQ709C8 BDP1P-201ENST00000582658 1990 ntBASIC3.05□□□□□ -1.92
VPS13CQ709C8 TTC3P1-201ENST00000399586 6081 ntBASIC3.05□□□□□ -1.92
VPS13CQ709C8 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
VPS13CQ709C8 AC073335.1-201ENST00000427776 363 ntBASIC3.05□□□□□ -1.92
VPS13CQ709C8 AC097713.2-201ENST00000430199 356 ntBASIC3.05□□□□□ -1.92
VPS13CQ709C8 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.05□□□□□ -1.92
VPS13CQ709C8 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.05□□□□□ -1.92
VPS13CQ709C8 RNA5SP164-201ENST00000516533 110 ntBASIC3.05□□□□□ -1.92
VPS13CQ709C8 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.05□□□□□ -1.92
VPS13CQ709C8 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.05□□□□□ -1.92
VPS13CQ709C8 AC011611.1-201ENST00000552179 197 ntBASIC3.05□□□□□ -1.92
VPS13CQ709C8 AC034105.3-201ENST00000565294 442 ntBASIC3.05□□□□□ -1.92
VPS13CQ709C8 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.05□□□□□ -1.92
VPS13CQ709C8 AC009464.1-201ENST00000615731 469 ntBASIC3.05□□□□□ -1.92
VPS13CQ709C8 AC024341.1-201ENST00000526444 1552 ntBASIC3.05□□□□□ -1.92
VPS13CQ709C8 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VPS13CQ709C8 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
VPS13CQ709C8 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
VPS13CQ709C8 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VPS13CQ709C8 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC3.05□□□□□ -1.92
VPS13CQ709C8 HMGB3P9-201ENST00000441799 583 ntBASIC3.05□□□□□ -1.92
VPS13CQ709C8 CYCSP35-201ENST00000451978 304 ntBASIC3.05□□□□□ -1.92
VPS13CQ709C8 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.05□□□□□ -1.92
VPS13CQ709C8 RPL12P22-201ENST00000519073 490 ntBASIC3.05□□□□□ -1.92
VPS13CQ709C8 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.05□□□□□ -1.92
VPS13CQ709C8 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
VPS13CQ709C8 AC004944.1-201ENST00000517807 3059 ntBASIC3.05□□□□□ -1.92
VPS13CQ709C8 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
VPS13CQ709C8 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC3.05□□□□□ -1.92
VPS13CQ709C8 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
VPS13CQ709C8 AC092435.4-201ENST00000623012 4159 ntBASIC3.04□□□□□ -1.92
VPS13CQ709C8 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
VPS13CQ709C8 RNA5SP187-201ENST00000384400 119 ntBASIC3.04□□□□□ -1.92
VPS13CQ709C8 AL034403.1-201ENST00000399414 885 ntBASIC3.04□□□□□ -1.92
VPS13CQ709C8 RN7SKP18-201ENST00000516005 275 ntBASIC3.04□□□□□ -1.92
VPS13CQ709C8 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.04□□□□□ -1.92
VPS13CQ709C8 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.04□□□□□ -1.92
VPS13CQ709C8 AC090286.3-201ENST00000573133 187 ntBASIC3.04□□□□□ -1.92
VPS13CQ709C8 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC3.04□□□□□ -1.92
VPS13CQ709C8 AC006023.1-201ENST00000603944 259 ntBASIC3.04□□□□□ -1.92
VPS13CQ709C8 AL391497.1-201ENST00000608671 547 ntBASIC3.04□□□□□ -1.92
VPS13CQ709C8 AL354976.1-201ENST00000613843 387 ntBASIC3.04□□□□□ -1.92
VPS13CQ709C8 AC026368.1-201ENST00000614934 690 ntBASIC3.04□□□□□ -1.92
VPS13CQ709C8 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
VPS13CQ709C8 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.04□□□□□ -1.92
VPS13CQ709C8 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms