Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 MTATP6P29-201ENST00000415057 132 ntBASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 MTATP6P18-201ENST00000417994 673 ntBASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 IGKV1OR9-1-201ENST00000424370 284 ntBASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 AC073335.1-201ENST00000427776 363 ntBASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 AC018804.1-201ENST00000430381 618 ntBASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 SKP1P1-201ENST00000438081 489 ntBASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 RPL17P49-201ENST00000443728 411 ntBASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 AC002075.1-201ENST00000457396 676 ntBASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 U8.20-201ENST00000459445 131 ntBASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 AC112204.1-201ENST00000502591 103 ntBASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 HMGB3P15-201ENST00000507326 574 ntBASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 PCBP2P3-201ENST00000509726 843 ntBASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 RNA5SP473-201ENST00000516402 125 ntBASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 RNU6-885P-201ENST00000516607 104 ntBASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 COX6B1P4-201ENST00000519826 484 ntBASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 AP005902.1-201ENST00000521358 186 ntBASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 POLR3GP2-201ENST00000588366 668 ntBASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 NDUFB9P1-201ENST00000604683 510 ntBASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 AC217777.1-201ENST00000570034 1471 ntBASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 ZNF519P1-201ENST00000449011 1626 ntBASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 NLRP3P1-201ENST00000622303 1785 ntBASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 AP002800.1-201ENST00000624982 2225 ntBASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 AC092447.10-201ENST00000620607 1652 ntBASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 RNA5SP382-201ENST00000363355 112 ntBASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 RNU6-777P-201ENST00000364265 104 ntBASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 RN7SKP130-201ENST00000364924 301 ntBASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 RN7SKP47-201ENST00000365347 328 ntBASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 RNU6-1297P-201ENST00000384415 104 ntBASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 MIR548I3-201ENST00000408378 149 ntBASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 MIR548I1-201ENST00000408810 149 ntBASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 RN7SKP254-201ENST00000410685 310 ntBASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 RNU6-847P-201ENST00000411115 108 ntBASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 RPL34P3-201ENST00000421454 338 ntBASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 AL139184.1-202ENST00000422303 222 ntBASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 RPL7AP14-201ENST00000424041 802 ntBASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 UQCRHP1-204ENST00000424609 274 ntBASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 AC023347.2-201ENST00000433994 462 ntBASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 AC234771.2-201ENST00000445718 597 ntBASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 RPL26P30-201ENST00000453533 435 ntBASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 PPP1R2P5-201ENST00000457256 603 ntBASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 SNORA81.1-201ENST00000458922 177 ntBASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 AC108693.1-201ENST00000496068 432 ntBASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 SCARNA6-201ENST00000515982 265 ntBASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 SNORA48.10-201ENST00000516965 160 ntBASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 PPIAP6-201ENST00000557078 499 ntBASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 AL589863.1-201ENST00000595383 631 ntBASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 AC087763.1-201ENST00000603391 286 ntBASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 AL133338.2-201ENST00000604292 736 ntBASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.72□□□□□ -1.33
FOXR1Q6PIV2 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms