Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
VARS2Q5ST30 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
VARS2Q5ST30 SAMMSON-226ENST00000642089 1582 ntBASIC7.67□□□□□ -1.18
VARS2Q5ST30 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
VARS2Q5ST30 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
VARS2Q5ST30 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
VARS2Q5ST30 ZNF806-201ENST00000438300 1774 ntBASIC7.66□□□□□ -1.18
VARS2Q5ST30 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
VARS2Q5ST30 DLD-204ENST00000437604 1859 ntTSL 2 BASIC7.66□□□□□ -1.18
VARS2Q5ST30 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
VARS2Q5ST30 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.66□□□□□ -1.18
VARS2Q5ST30 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
VARS2Q5ST30 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
VARS2Q5ST30 HSP90AA2P-201ENST00000530115 2196 ntBASIC7.66□□□□□ -1.18
VARS2Q5ST30 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC7.66□□□□□ -1.18
VARS2Q5ST30 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC7.66□□□□□ -1.18
VARS2Q5ST30 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
VARS2Q5ST30 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC7.66□□□□□ -1.18
VARS2Q5ST30 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
VARS2Q5ST30 RNU6-858P-201ENST00000362436 107 ntBASIC7.66□□□□□ -1.18
VARS2Q5ST30 RNA5SP472-201ENST00000363868 119 ntBASIC7.66□□□□□ -1.18
VARS2Q5ST30 RNU4-50P-201ENST00000364361 141 ntBASIC7.66□□□□□ -1.18
VARS2Q5ST30 PDCL3P5-201ENST00000398028 722 ntBASIC7.66□□□□□ -1.18
VARS2Q5ST30 AL355375.1-201ENST00000405686 392 ntBASIC7.66□□□□□ -1.18
VARS2Q5ST30 Z99755.1-201ENST00000414048 380 ntBASIC7.66□□□□□ -1.18
VARS2Q5ST30 BMS1P22-201ENST00000414726 313 ntBASIC7.66□□□□□ -1.18
VARS2Q5ST30 AC104698.1-201ENST00000435671 276 ntBASIC7.66□□□□□ -1.18
VARS2Q5ST30 AC012075.1-201ENST00000436549 580 ntBASIC7.66□□□□□ -1.18
VARS2Q5ST30 OR3D1P-201ENST00000438288 955 ntBASIC7.66□□□□□ -1.18
VARS2Q5ST30 RPL12P11-201ENST00000439970 501 ntBASIC7.66□□□□□ -1.18
VARS2Q5ST30 UBE2V1P5-201ENST00000440070 405 ntBASIC7.66□□□□□ -1.18
VARS2Q5ST30 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC7.66□□□□□ -1.18
VARS2Q5ST30 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC7.66□□□□□ -1.18
VARS2Q5ST30 RN7SL790P-201ENST00000474043 298 ntBASIC7.66□□□□□ -1.18
VARS2Q5ST30 AC109925.1-201ENST00000478069 331 ntBASIC7.66□□□□□ -1.18
VARS2Q5ST30 RPS27P23-201ENST00000487608 251 ntBASIC7.66□□□□□ -1.18
VARS2Q5ST30 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC7.66□□□□□ -1.18
VARS2Q5ST30 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC7.66□□□□□ -1.18
VARS2Q5ST30 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC7.66□□□□□ -1.18
VARS2Q5ST30 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC7.66□□□□□ -1.18
VARS2Q5ST30 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC7.66□□□□□ -1.18
VARS2Q5ST30 RPL21P12-201ENST00000559810 515 ntBASIC7.66□□□□□ -1.18
VARS2Q5ST30 AC004584.2-201ENST00000570407 410 ntBASIC7.66□□□□□ -1.18
VARS2Q5ST30 AC068790.3-201ENST00000602988 553 ntBASIC7.66□□□□□ -1.18
VARS2Q5ST30 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC7.66□□□□□ -1.18
VARS2Q5ST30 NAA60-237ENST00000615865 326 ntTSL 5 BASIC7.66□□□□□ -1.18
VARS2Q5ST30 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
VARS2Q5ST30 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
VARS2Q5ST30 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
VARS2Q5ST30 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
VARS2Q5ST30 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
VARS2Q5ST30 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
VARS2Q5ST30 AC009166.2-201ENST00000624410 2833 ntBASIC7.66□□□□□ -1.18
VARS2Q5ST30 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC7.66□□□□□ -1.18
VARS2Q5ST30 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
VARS2Q5ST30 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
VARS2Q5ST30 AL157831.2-201ENST00000564681 3095 ntBASIC7.66□□□□□ -1.18
VARS2Q5ST30 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC7.66□□□□□ -1.18
VARS2Q5ST30 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
VARS2Q5ST30 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
VARS2Q5ST30 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC7.66□□□□□ -1.18
VARS2Q5ST30 AC134882.1-201ENST00000603738 1676 ntBASIC7.66□□□□□ -1.18
VARS2Q5ST30 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC7.66□□□□□ -1.18
VARS2Q5ST30 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
VARS2Q5ST30 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
VARS2Q5ST30 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
VARS2Q5ST30 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
VARS2Q5ST30 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
VARS2Q5ST30 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
VARS2Q5ST30 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
VARS2Q5ST30 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
VARS2Q5ST30 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
VARS2Q5ST30 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
VARS2Q5ST30 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
VARS2Q5ST30 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC7.65□□□□□ -1.18
VARS2Q5ST30 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
VARS2Q5ST30 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
VARS2Q5ST30 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
VARS2Q5ST30 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
VARS2Q5ST30 RNU6-115P-201ENST00000364310 107 ntBASIC7.65□□□□□ -1.18
VARS2Q5ST30 MIR152-201ENST00000385212 87 ntBASIC7.65□□□□□ -1.18
VARS2Q5ST30 RNA5SP53-201ENST00000391299 120 ntBASIC7.65□□□□□ -1.18
VARS2Q5ST30 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
VARS2Q5ST30 RNU6-121P-201ENST00000410525 99 ntBASIC7.65□□□□□ -1.18
VARS2Q5ST30 RNU4-78P-201ENST00000410940 126 ntBASIC7.65□□□□□ -1.18
VARS2Q5ST30 AC096664.2-201ENST00000411843 406 ntBASIC7.65□□□□□ -1.18
VARS2Q5ST30 RPS6P23-201ENST00000413224 722 ntBASIC7.65□□□□□ -1.18
VARS2Q5ST30 AC140479.3-201ENST00000418944 1126 ntBASIC7.65□□□□□ -1.18
VARS2Q5ST30 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
VARS2Q5ST30 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC7.65□□□□□ -1.18
VARS2Q5ST30 ANKRD54P1-201ENST00000433115 471 ntBASIC7.65□□□□□ -1.18
VARS2Q5ST30 OR4C10P-201ENST00000434991 931 ntBASIC7.65□□□□□ -1.18
VARS2Q5ST30 GOT2P2-201ENST00000450663 1251 ntBASIC7.65□□□□□ -1.18
VARS2Q5ST30 AC245028.2-201ENST00000458673 253 ntBASIC7.65□□□□□ -1.18
VARS2Q5ST30 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
VARS2Q5ST30 RN7SL849P-201ENST00000485236 295 ntBASIC7.65□□□□□ -1.18
VARS2Q5ST30 AL591122.1-201ENST00000487348 492 ntBASIC7.65□□□□□ -1.18
VARS2Q5ST30 AP001025.2-201ENST00000490908 477 ntBASIC7.65□□□□□ -1.18
VARS2Q5ST30 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC7.65□□□□□ -1.18
VARS2Q5ST30 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC7.65□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 184.6 ms