Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 SNORA59A-201ENST00000459326 152 ntBASIC4.8□□□□□ -1.64
SCN7AQ01118 RPS4XP10-201ENST00000465034 731 ntBASIC4.8□□□□□ -1.64
SCN7AQ01118 AC006511.1-201ENST00000470614 315 ntBASIC4.8□□□□□ -1.64
SCN7AQ01118 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
SCN7AQ01118 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.8□□□□□ -1.64
SCN7AQ01118 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.8□□□□□ -1.64
SCN7AQ01118 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SCN7AQ01118 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCN7AQ01118 USP8P1-201ENST00000494673 3183 ntBASIC4.79□□□□□ -1.64
SCN7AQ01118 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SCN7AQ01118 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.79□□□□□ -1.64
SCN7AQ01118 AC096664.2-201ENST00000411843 406 ntBASIC4.79□□□□□ -1.64
SCN7AQ01118 RPL23AP12-201ENST00000467573 473 ntBASIC4.79□□□□□ -1.64
SCN7AQ01118 HMGN1P11-201ENST00000508668 303 ntBASIC4.79□□□□□ -1.64
SCN7AQ01118 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.79□□□□□ -1.64
SCN7AQ01118 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.79□□□□□ -1.64
SCN7AQ01118 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.79□□□□□ -1.64
SCN7AQ01118 AC243756.2-201ENST00000618406 463 ntBASIC4.79□□□□□ -1.64
SCN7AQ01118 AC112198.2-201ENST00000426589 6996 ntBASIC4.79□□□□□ -1.64
SCN7AQ01118 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCN7AQ01118 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCN7AQ01118 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCN7AQ01118 AC125336.1-201ENST00000508893 2827 ntBASIC4.79□□□□□ -1.64
SCN7AQ01118 AC083899.2-201ENST00000423285 1376 ntBASIC4.79□□□□□ -1.64
SCN7AQ01118 MTND5P1-201ENST00000445440 1375 ntBASIC4.79□□□□□ -1.64
SCN7AQ01118 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
SCN7AQ01118 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SCN7AQ01118 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SCN7AQ01118 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
SCN7AQ01118 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SCN7AQ01118 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SCN7AQ01118 RPL7P60-201ENST00000397636 735 ntBASIC4.78□□□□□ -1.64
SCN7AQ01118 SNORA3.3-201ENST00000408712 125 ntBASIC4.78□□□□□ -1.64
SCN7AQ01118 RPL7AP73-201ENST00000413490 353 ntBASIC4.78□□□□□ -1.64
SCN7AQ01118 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.78□□□□□ -1.64
SCN7AQ01118 EIF4EP1-201ENST00000422311 642 ntBASIC4.78□□□□□ -1.64
SCN7AQ01118 RPL21P11-201ENST00000461458 483 ntBASIC4.78□□□□□ -1.64
SCN7AQ01118 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
SCN7AQ01118 ZNF415P1-201ENST00000582279 1166 ntBASIC4.78□□□□□ -1.64
SCN7AQ01118 AC026368.1-201ENST00000614934 690 ntBASIC4.78□□□□□ -1.64
SCN7AQ01118 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.78□□□□□ -1.64
SCN7AQ01118 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
SCN7AQ01118 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
SCN7AQ01118 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SCN7AQ01118 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SCN7AQ01118 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SCN7AQ01118 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.78□□□□□ -1.64
SCN7AQ01118 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.77□□□□□ -1.65
SCN7AQ01118 IL6STP1-201ENST00000346911 1020 ntBASIC4.77□□□□□ -1.65
SCN7AQ01118 OR6K3-202ENST00000368146 996 ntBASIC4.77□□□□□ -1.65
SCN7AQ01118 MIR218-2-201ENST00000385006 110 ntBASIC4.77□□□□□ -1.65
SCN7AQ01118 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.77□□□□□ -1.65
SCN7AQ01118 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.77□□□□□ -1.65
SCN7AQ01118 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.77□□□□□ -1.65
SCN7AQ01118 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.77□□□□□ -1.65
SCN7AQ01118 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.77□□□□□ -1.65
SCN7AQ01118 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.77□□□□□ -1.65
SCN7AQ01118 AL591424.2-201ENST00000617023 128 ntBASIC4.77□□□□□ -1.65
SCN7AQ01118 AC018816.2-201ENST00000621460 353 ntBASIC4.77□□□□□ -1.65
SCN7AQ01118 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
SCN7AQ01118 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SCN7AQ01118 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SCN7AQ01118 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.77□□□□□ -1.65
SCN7AQ01118 AC010300.1-201ENST00000600671 5134 ntBASIC4.77□□□□□ -1.65
SCN7AQ01118 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
SCN7AQ01118 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.77□□□□□ -1.65
SCN7AQ01118 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.77□□□□□ -1.65
SCN7AQ01118 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
SCN7AQ01118 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
SCN7AQ01118 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.77□□□□□ -1.65
SCN7AQ01118 MTCO1P12-201ENST00000414273 1543 ntBASIC4.77□□□□□ -1.65
SCN7AQ01118 RNU1-33P-201ENST00000364249 162 ntBASIC4.77□□□□□ -1.65
SCN7AQ01118 MIR34B-201ENST00000385076 84 ntBASIC4.77□□□□□ -1.65
SCN7AQ01118 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.77□□□□□ -1.65
SCN7AQ01118 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.77□□□□□ -1.65
SCN7AQ01118 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.77□□□□□ -1.65
SCN7AQ01118 AL591503.2-201ENST00000442314 1005 ntBASIC4.77□□□□□ -1.65
SCN7AQ01118 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.77□□□□□ -1.65
SCN7AQ01118 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.77□□□□□ -1.65
SCN7AQ01118 AC084198.1-201ENST00000477747 402 ntBASIC4.77□□□□□ -1.65
SCN7AQ01118 SNORA70.18-201ENST00000516696 98 ntBASIC4.77□□□□□ -1.65
SCN7AQ01118 OR7E13P-201ENST00000526052 910 ntBASIC4.77□□□□□ -1.65
SCN7AQ01118 UBTFL9-201ENST00000534504 1148 ntBASIC4.77□□□□□ -1.65
SCN7AQ01118 MTND6P33-201ENST00000571794 183 ntBASIC4.77□□□□□ -1.65
SCN7AQ01118 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.77□□□□□ -1.65
SCN7AQ01118 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.77□□□□□ -1.65
SCN7AQ01118 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
SCN7AQ01118 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.76□□□□□ -1.65
SCN7AQ01118 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SCN7AQ01118 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
SCN7AQ01118 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.76□□□□□ -1.65
SCN7AQ01118 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SCN7AQ01118 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
SCN7AQ01118 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SCN7AQ01118 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SCN7AQ01118 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SCN7AQ01118 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
SCN7AQ01118 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SCN7AQ01118 RNVU1-14-201ENST00000384770 164 ntBASIC4.76□□□□□ -1.65
SCN7AQ01118 HDGFP1-201ENST00000405943 252 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms