Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.83□□□□□ -1.64
CCNA1P78396 AC008013.2-202ENST00000637965 364 ntBASIC4.83□□□□□ -1.64
CCNA1P78396 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCNA1P78396 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCNA1P78396 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CCNA1P78396 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCNA1P78396 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CCNA1P78396 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CCNA1P78396 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CCNA1P78396 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CCNA1P78396 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCNA1P78396 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CCNA1P78396 AC007390.2-201ENST00000606229 3803 ntBASIC4.83□□□□□ -1.64
CCNA1P78396 USP9YP4-201ENST00000424401 1745 ntBASIC4.83□□□□□ -1.64
CCNA1P78396 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CCNA1P78396 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.83□□□□□ -1.64
CCNA1P78396 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CCNA1P78396 AC006042.3-201ENST00000454684 1469 ntBASIC4.82□□□□□ -1.64
CCNA1P78396 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCNA1P78396 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCNA1P78396 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCNA1P78396 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCNA1P78396 RNU1-44P-201ENST00000384453 163 ntBASIC4.82□□□□□ -1.64
CCNA1P78396 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CCNA1P78396 AL359643.1-201ENST00000404109 423 ntBASIC4.82□□□□□ -1.64
CCNA1P78396 AL078604.1-201ENST00000404609 466 ntBASIC4.82□□□□□ -1.64
CCNA1P78396 TCEA1P4-201ENST00000415066 844 ntBASIC4.82□□□□□ -1.64
CCNA1P78396 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.82□□□□□ -1.64
CCNA1P78396 MTCYBP29-201ENST00000436327 1006 ntBASIC4.82□□□□□ -1.64
CCNA1P78396 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.82□□□□□ -1.64
CCNA1P78396 AL358232.1-201ENST00000448030 501 ntBASIC4.82□□□□□ -1.64
CCNA1P78396 RPL38P1-201ENST00000460914 211 ntBASIC4.82□□□□□ -1.64
CCNA1P78396 AC091564.1-201ENST00000464563 479 ntBASIC4.82□□□□□ -1.64
CCNA1P78396 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.82□□□□□ -1.64
CCNA1P78396 AF213884.1-201ENST00000488102 463 ntBASIC4.82□□□□□ -1.64
CCNA1P78396 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.82□□□□□ -1.64
CCNA1P78396 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.82□□□□□ -1.64
CCNA1P78396 RN7SKP46-201ENST00000515942 234 ntBASIC4.82□□□□□ -1.64
CCNA1P78396 RNA5SP360-201ENST00000516555 118 ntBASIC4.82□□□□□ -1.64
CCNA1P78396 RNA5SP143-201ENST00000516936 115 ntBASIC4.82□□□□□ -1.64
CCNA1P78396 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.82□□□□□ -1.64
CCNA1P78396 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.82□□□□□ -1.64
CCNA1P78396 AC007423.1-201ENST00000605009 627 ntBASIC4.82□□□□□ -1.64
CCNA1P78396 AC010201.1-201ENST00000605051 540 ntBASIC4.82□□□□□ -1.64
CCNA1P78396 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.82□□□□□ -1.64
CCNA1P78396 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCNA1P78396 Z73965.1-201ENST00000623412 2297 ntBASIC4.82□□□□□ -1.64
CCNA1P78396 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCNA1P78396 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.82□□□□□ -1.64
CCNA1P78396 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCNA1P78396 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCNA1P78396 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCNA1P78396 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCNA1P78396 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCNA1P78396 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.82□□□□□ -1.64
CCNA1P78396 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CCNA1P78396 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.81□□□□□ -1.64
CCNA1P78396 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.81□□□□□ -1.64
CCNA1P78396 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCNA1P78396 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCNA1P78396 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCNA1P78396 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCNA1P78396 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.81□□□□□ -1.64
CCNA1P78396 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CCNA1P78396 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCNA1P78396 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCNA1P78396 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
CCNA1P78396 MIR1179-201ENST00000408703 91 ntBASIC4.81□□□□□ -1.64
CCNA1P78396 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.81□□□□□ -1.64
CCNA1P78396 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.81□□□□□ -1.64
CCNA1P78396 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.81□□□□□ -1.64
CCNA1P78396 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.81□□□□□ -1.64
CCNA1P78396 RPL31P20-201ENST00000449593 360 ntBASIC4.81□□□□□ -1.64
CCNA1P78396 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCNA1P78396 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.81□□□□□ -1.64
CCNA1P78396 RPL23AP65-201ENST00000475608 468 ntBASIC4.81□□□□□ -1.64
CCNA1P78396 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.81□□□□□ -1.64
CCNA1P78396 AC110792.1-201ENST00000491826 472 ntBASIC4.81□□□□□ -1.64
CCNA1P78396 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.81□□□□□ -1.64
CCNA1P78396 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.81□□□□□ -1.64
CCNA1P78396 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.81□□□□□ -1.64
CCNA1P78396 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
CCNA1P78396 AC108471.1-201ENST00000513977 287 ntBASIC4.81□□□□□ -1.64
CCNA1P78396 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.81□□□□□ -1.64
CCNA1P78396 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.81□□□□□ -1.64
CCNA1P78396 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.81□□□□□ -1.64
CCNA1P78396 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.81□□□□□ -1.64
CCNA1P78396 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.81□□□□□ -1.64
CCNA1P78396 MIR5685-201ENST00000579080 79 ntBASIC4.81□□□□□ -1.64
CCNA1P78396 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.81□□□□□ -1.64
CCNA1P78396 AC008739.3-201ENST00000603262 127 ntBASIC4.81□□□□□ -1.64
CCNA1P78396 AC022106.2-201ENST00000620114 757 ntBASIC4.81□□□□□ -1.64
CCNA1P78396 AC112200.1-201ENST00000625015 234 ntBASIC4.81□□□□□ -1.64
CCNA1P78396 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.81□□□□□ -1.64
CCNA1P78396 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCNA1P78396 HSPD1P14-201ENST00000432666 1618 ntBASIC4.81□□□□□ -1.64
CCNA1P78396 AL161912.2-201ENST00000565707 3007 ntBASIC4.81□□□□□ -1.64
CCNA1P78396 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCNA1P78396 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
CCNA1P78396 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms