Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.66□□□□□ -1.66
CLCNKAP51800 BNIP3P1-201ENST00000547295 580 ntBASIC4.66□□□□□ -1.66
CLCNKAP51800 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.66□□□□□ -1.66
CLCNKAP51800 CYCSP40-201ENST00000575927 294 ntBASIC4.66□□□□□ -1.66
CLCNKAP51800 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.66□□□□□ -1.66
CLCNKAP51800 AP002906.1-201ENST00000603405 233 ntBASIC4.66□□□□□ -1.66
CLCNKAP51800 AC010200.2-201ENST00000605098 235 ntBASIC4.66□□□□□ -1.66
CLCNKAP51800 AC106052.1-201ENST00000608029 497 ntBASIC4.66□□□□□ -1.66
CLCNKAP51800 AC011472.4-201ENST00000615848 491 ntBASIC4.66□□□□□ -1.66
CLCNKAP51800 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.66□□□□□ -1.66
CLCNKAP51800 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLCNKAP51800 AC104985.3-201ENST00000623479 597 ntBASIC4.66□□□□□ -1.66
CLCNKAP51800 AL596275.2-204ENST00000641628 552 ntBASIC4.66□□□□□ -1.66
CLCNKAP51800 AC139713.2-210ENST00000641741 992 ntBASIC4.66□□□□□ -1.66
CLCNKAP51800 AL596275.2-206ENST00000641957 626 ntBASIC4.66□□□□□ -1.66
CLCNKAP51800 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CLCNKAP51800 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
CLCNKAP51800 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLCNKAP51800 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLCNKAP51800 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLCNKAP51800 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLCNKAP51800 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.66□□□□□ -1.66
CLCNKAP51800 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLCNKAP51800 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.66
CLCNKAP51800 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.65□□□□□ -1.66
CLCNKAP51800 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
CLCNKAP51800 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.66
CLCNKAP51800 AC010928.1-201ENST00000592477 1447 ntBASIC4.65□□□□□ -1.66
CLCNKAP51800 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
CLCNKAP51800 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CLCNKAP51800 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
CLCNKAP51800 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CLCNKAP51800 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CLCNKAP51800 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CLCNKAP51800 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CLCNKAP51800 AL590240.1-201ENST00000334118 313 ntBASIC4.65□□□□□ -1.67
CLCNKAP51800 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CLCNKAP51800 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CLCNKAP51800 SNORD65C-201ENST00000390962 71 ntBASIC4.65□□□□□ -1.67
CLCNKAP51800 AL590762.2-201ENST00000395798 571 ntBASIC4.65□□□□□ -1.67
CLCNKAP51800 RPS3AP23-201ENST00000401762 784 ntBASIC4.65□□□□□ -1.67
CLCNKAP51800 RPS16P5-201ENST00000406501 404 ntBASIC4.65□□□□□ -1.67
CLCNKAP51800 AC013404.1-201ENST00000413068 249 ntBASIC4.65□□□□□ -1.67
CLCNKAP51800 VTA1P1-201ENST00000414044 866 ntBASIC4.65□□□□□ -1.67
CLCNKAP51800 MTATP6P20-201ENST00000414147 562 ntBASIC4.65□□□□□ -1.67
CLCNKAP51800 AC048351.1-201ENST00000420064 602 ntBASIC4.65□□□□□ -1.67
CLCNKAP51800 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.65□□□□□ -1.67
CLCNKAP51800 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.65□□□□□ -1.67
CLCNKAP51800 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.65□□□□□ -1.67
CLCNKAP51800 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.65□□□□□ -1.67
CLCNKAP51800 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.65□□□□□ -1.67
CLCNKAP51800 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.65□□□□□ -1.67
CLCNKAP51800 EIF2S2P2-201ENST00000447161 982 ntBASIC4.65□□□□□ -1.67
CLCNKAP51800 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.65□□□□□ -1.67
CLCNKAP51800 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.65□□□□□ -1.67
CLCNKAP51800 AC010627.1-201ENST00000503819 1294 ntBASIC4.65□□□□□ -1.67
CLCNKAP51800 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.65□□□□□ -1.67
CLCNKAP51800 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.65□□□□□ -1.67
CLCNKAP51800 RNU2-30P-201ENST00000516209 141 ntBASIC4.65□□□□□ -1.67
CLCNKAP51800 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.65□□□□□ -1.67
CLCNKAP51800 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.65□□□□□ -1.67
CLCNKAP51800 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.65□□□□□ -1.67
CLCNKAP51800 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.65□□□□□ -1.67
CLCNKAP51800 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.65□□□□□ -1.67
CLCNKAP51800 CR383656.6-201ENST00000550518 394 ntBASIC4.65□□□□□ -1.67
CLCNKAP51800 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.65□□□□□ -1.67
CLCNKAP51800 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.65□□□□□ -1.67
CLCNKAP51800 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.65□□□□□ -1.67
CLCNKAP51800 SS18L2P2-201ENST00000583960 235 ntBASIC4.65□□□□□ -1.67
CLCNKAP51800 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.65□□□□□ -1.67
CLCNKAP51800 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.65□□□□□ -1.67
CLCNKAP51800 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.65□□□□□ -1.67
CLCNKAP51800 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.65□□□□□ -1.67
CLCNKAP51800 AC096586.1-201ENST00000610267 561 ntBASIC4.65□□□□□ -1.67
CLCNKAP51800 AC009159.2-201ENST00000617603 606 ntBASIC4.65□□□□□ -1.67
CLCNKAP51800 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.65□□□□□ -1.67
CLCNKAP51800 AC004232.3-201ENST00000622977 525 ntBASIC4.65□□□□□ -1.67
CLCNKAP51800 AP003497.2-201ENST00000624220 967 ntBASIC4.65□□□□□ -1.67
CLCNKAP51800 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CLCNKAP51800 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLCNKAP51800 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLCNKAP51800 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLCNKAP51800 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.65□□□□□ -1.67
CLCNKAP51800 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
CLCNKAP51800 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.65□□□□□ -1.67
CLCNKAP51800 AL136164.3-201ENST00000624429 3978 ntBASIC4.65□□□□□ -1.67
CLCNKAP51800 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.65□□□□□ -1.67
CLCNKAP51800 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CLCNKAP51800 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CLCNKAP51800 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CLCNKAP51800 AL118496.1-201ENST00000440201 1812 ntBASIC4.65□□□□□ -1.67
CLCNKAP51800 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CLCNKAP51800 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLCNKAP51800 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLCNKAP51800 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CLCNKAP51800 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLCNKAP51800 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CLCNKAP51800 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CLCNKAP51800 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CLCNKAP51800 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms