Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AL035079.1-201ENST00000405210 287 ntBASIC4.57□□□□□ -1.68
SOX2P48431 AL355379.1-201ENST00000405542 640 ntBASIC4.57□□□□□ -1.68
SOX2P48431 AL138880.1-201ENST00000405824 642 ntBASIC4.57□□□□□ -1.68
SOX2P48431 AL133264.1-201ENST00000407157 562 ntBASIC4.57□□□□□ -1.68
SOX2P48431 RPL23AP47-201ENST00000408017 460 ntBASIC4.57□□□□□ -1.68
SOX2P48431 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SOX2P48431 OR6E1P-201ENST00000414424 923 ntBASIC4.57□□□□□ -1.68
SOX2P48431 AC115283.1-201ENST00000427353 400 ntBASIC4.57□□□□□ -1.68
SOX2P48431 MTND6P12-201ENST00000428247 522 ntBASIC4.57□□□□□ -1.68
SOX2P48431 SKP1P3-201ENST00000429280 487 ntBASIC4.57□□□□□ -1.68
SOX2P48431 RPL31P54-201ENST00000429803 370 ntBASIC4.57□□□□□ -1.68
SOX2P48431 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.57□□□□□ -1.68
SOX2P48431 AL590103.1-201ENST00000434488 307 ntBASIC4.57□□□□□ -1.68
SOX2P48431 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SOX2P48431 AL589765.3-201ENST00000446084 462 ntBASIC4.57□□□□□ -1.68
SOX2P48431 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.57□□□□□ -1.68
SOX2P48431 BX842559.2-201ENST00000451418 605 ntBASIC4.57□□□□□ -1.68
SOX2P48431 DNAJB5P1-201ENST00000454004 806 ntBASIC4.57□□□□□ -1.68
SOX2P48431 RPL37P3-201ENST00000456825 293 ntBASIC4.57□□□□□ -1.68
SOX2P48431 MTCO2P18-201ENST00000457151 658 ntBASIC4.57□□□□□ -1.68
SOX2P48431 AC079168.1-201ENST00000458741 345 ntBASIC4.57□□□□□ -1.68
SOX2P48431 AC010307.1-201ENST00000467206 836 ntBASIC4.57□□□□□ -1.68
SOX2P48431 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.57□□□□□ -1.68
SOX2P48431 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.57□□□□□ -1.68
SOX2P48431 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.57□□□□□ -1.68
SOX2P48431 AC011352.3-201ENST00000505162 593 ntBASIC4.57□□□□□ -1.68
SOX2P48431 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.57□□□□□ -1.68
SOX2P48431 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.57□□□□□ -1.68
SOX2P48431 RN7SKP31-201ENST00000516354 278 ntBASIC4.57□□□□□ -1.68
SOX2P48431 RNU6-885P-201ENST00000516607 104 ntBASIC4.57□□□□□ -1.68
SOX2P48431 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.57□□□□□ -1.68
SOX2P48431 HIGD1AP6-201ENST00000521833 279 ntBASIC4.57□□□□□ -1.68
SOX2P48431 AP001207.1-201ENST00000524051 481 ntBASIC4.57□□□□□ -1.68
SOX2P48431 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.57□□□□□ -1.68
SOX2P48431 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4.57□□□□□ -1.68
SOX2P48431 AC007954.1-201ENST00000554198 494 ntBASIC4.57□□□□□ -1.68
SOX2P48431 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.57□□□□□ -1.68
SOX2P48431 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.57□□□□□ -1.68
SOX2P48431 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.57□□□□□ -1.68
SOX2P48431 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.57□□□□□ -1.68
SOX2P48431 MIR4472-2-201ENST00000582069 67 ntBASIC4.57□□□□□ -1.68
SOX2P48431 AC079315.1-201ENST00000602952 623 ntBASIC4.57□□□□□ -1.68
SOX2P48431 AP000811.1-201ENST00000603803 651 ntBASIC4.57□□□□□ -1.68
SOX2P48431 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.57□□□□□ -1.68
SOX2P48431 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.57□□□□□ -1.68
SOX2P48431 AC005332.6-201ENST00000613178 446 ntBASIC4.57□□□□□ -1.68
SOX2P48431 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SOX2P48431 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
SOX2P48431 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SOX2P48431 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SOX2P48431 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.57□□□□□ -1.68
SOX2P48431 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.57□□□□□ -1.68
SOX2P48431 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SOX2P48431 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
SOX2P48431 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SOX2P48431 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SOX2P48431 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.57□□□□□ -1.68
SOX2P48431 STX3-208ENST00000641815 3236 ntBASIC4.57□□□□□ -1.68
SOX2P48431 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SOX2P48431 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.57□□□□□ -1.68
SOX2P48431 AC011447.7-201ENST00000624228 1590 ntBASIC4.57□□□□□ -1.68
SOX2P48431 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.56□□□□□ -1.68
SOX2P48431 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
SOX2P48431 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SOX2P48431 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SOX2P48431 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.56□□□□□ -1.68
SOX2P48431 DDX43P2-201ENST00000604753 1354 ntBASIC4.56□□□□□ -1.68
SOX2P48431 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
SOX2P48431 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.56□□□□□ -1.68
SOX2P48431 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.56□□□□□ -1.68
SOX2P48431 AC011477.1-204ENST00000623416 1325 ntBASIC4.56□□□□□ -1.68
SOX2P48431 AL672167.1-204ENST00000641875 3017 ntBASIC4.56□□□□□ -1.68
SOX2P48431 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SOX2P48431 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.56□□□□□ -1.68
SOX2P48431 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SOX2P48431 AC022031.1-201ENST00000585985 2593 ntBASIC4.56□□□□□ -1.68
SOX2P48431 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SOX2P48431 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SOX2P48431 AC005294.1-201ENST00000355509 281 ntBASIC4.56□□□□□ -1.68
SOX2P48431 RNU6-582P-201ENST00000362989 107 ntBASIC4.56□□□□□ -1.68
SOX2P48431 RN7SKP275-201ENST00000364626 301 ntBASIC4.56□□□□□ -1.68
SOX2P48431 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.56□□□□□ -1.68
SOX2P48431 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
SOX2P48431 NUDT19P3-201ENST00000404698 555 ntBASIC4.56□□□□□ -1.68
SOX2P48431 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.56□□□□□ -1.68
SOX2P48431 HMGN1P20-201ENST00000411849 300 ntBASIC4.56□□□□□ -1.68
SOX2P48431 AL121878.1-201ENST00000418638 859 ntBASIC4.56□□□□□ -1.68
SOX2P48431 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.56□□□□□ -1.68
SOX2P48431 AL589823.1-201ENST00000429577 183 ntBASIC4.56□□□□□ -1.68
SOX2P48431 AC244035.1-201ENST00000430042 390 ntBASIC4.56□□□□□ -1.68
SOX2P48431 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.56□□□□□ -1.68
SOX2P48431 AL360221.1-201ENST00000445989 335 ntBASIC4.56□□□□□ -1.68
SOX2P48431 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC4.56□□□□□ -1.68
SOX2P48431 AL445665.1-202ENST00000452436 324 ntBASIC4.56□□□□□ -1.68
SOX2P48431 MTCO3P11-201ENST00000455103 774 ntBASIC4.56□□□□□ -1.68
SOX2P48431 CCDC75P1-201ENST00000469247 791 ntBASIC4.56□□□□□ -1.68
SOX2P48431 NCOR1P1-202ENST00000486162 291 ntBASIC4.56□□□□□ -1.68
SOX2P48431 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.56□□□□□ -1.68
SOX2P48431 AC069304.1-201ENST00000491593 704 ntBASIC4.56□□□□□ -1.68
SOX2P48431 RPS6P4-201ENST00000494693 758 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 151.9 ms