Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.02□□□□□ -1.77
NKX2-1P43699 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.02□□□□□ -1.77
NKX2-1P43699 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.02□□□□□ -1.77
NKX2-1P43699 MTCO2P15-201ENST00000532655 656 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.02□□□□□ -1.77
NKX2-1P43699 LRRC34P1-201ENST00000542742 915 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.02□□□□□ -1.77
NKX2-1P43699 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.02□□□□□ -1.77
NKX2-1P43699 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.02□□□□□ -1.77
NKX2-1P43699 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.02□□□□□ -1.77
NKX2-1P43699 AC090888.3-201ENST00000558917 509 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 AC087477.6-201ENST00000559595 843 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.02□□□□□ -1.77
NKX2-1P43699 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.02□□□□□ -1.77
NKX2-1P43699 AC008536.1-201ENST00000602872 669 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 AC004908.3-201ENST00000610248 625 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.02□□□□□ -1.77
NKX2-1P43699 AC105227.2-201ENST00000615075 605 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 uc_338.18-201ENST00000615451 175 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 AC009464.1-201ENST00000615731 469 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 AL049794.2-201ENST00000616301 365 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 MIR6864-201ENST00000617935 70 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 AP000484.1-201ENST00000620067 1252 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 AL672167.1-203ENST00000641299 2975 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 AL596275.2-204ENST00000641628 552 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 AL596275.2-206ENST00000641957 626 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.02□□□□□ -1.77
NKX2-1P43699 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NKX2-1P43699 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NKX2-1P43699 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NKX2-1P43699 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
NKX2-1P43699 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
NKX2-1P43699 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.02□□□□□ -1.77
NKX2-1P43699 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.02□□□□□ -1.77
NKX2-1P43699 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.01□□□□□ -1.77
NKX2-1P43699 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
NKX2-1P43699 PANDAR-201ENST00000629595 1506 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.01□□□□□ -1.77
NKX2-1P43699 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NKX2-1P43699 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NKX2-1P43699 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
NKX2-1P43699 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
NKX2-1P43699 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.01□□□□□ -1.77
NKX2-1P43699 OR1L1-202ENST00000373686 1083 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 RNU6-224P-201ENST00000384055 107 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 SNORA70.10-201ENST00000384515 134 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 SNORA66-201ENST00000384792 133 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 MIR143-201ENST00000385300 106 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 SNORA17A-201ENST00000391185 133 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NKX2-1P43699 RNU4-22P-201ENST00000411058 166 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.01□□□□□ -1.77
NKX2-1P43699 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.01□□□□□ -1.77
NKX2-1P43699 Z75741.2-201ENST00000417272 1167 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 AC073136.2-201ENST00000417282 849 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.01□□□□□ -1.77
NKX2-1P43699 RPS3AP37-201ENST00000419176 745 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 EI24P4-201ENST00000423683 1078 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 RPF2P1-201ENST00000424137 906 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 HMGB3P9-201ENST00000441799 583 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 GEMIN8P3-201ENST00000445417 720 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.01□□□□□ -1.77
NKX2-1P43699 AC005008.1-201ENST00000456151 612 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 Z92846.1-201ENST00000456203 268 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.01□□□□□ -1.77
NKX2-1P43699 AC100832.1-201ENST00000471945 383 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 RPL23AP44-201ENST00000482216 473 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NKX2-1P43699 AC069528.1-202ENST00000482888 637 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 MTCO3P35-201ENST00000485582 781 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NKX2-1P43699 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.01□□□□□ -1.77
NKX2-1P43699 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.01□□□□□ -1.77
NKX2-1P43699 RPS4XP18-201ENST00000495480 763 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 AL136038.1-201ENST00000497246 351 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.01□□□□□ -1.77
NKX2-1P43699 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.01□□□□□ -1.77
NKX2-1P43699 AC112673.1-201ENST00000513168 575 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 MTATP6P1-201ENST00000514057 681 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.01□□□□□ -1.77
NKX2-1P43699 AF279873.1-201ENST00000523393 313 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.01□□□□□ -1.77
NKX2-1P43699 AC012339.2-201ENST00000523996 453 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.01□□□□□ -1.77
NKX2-1P43699 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.01□□□□□ -1.77
NKX2-1P43699 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.01□□□□□ -1.77
NKX2-1P43699 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.01□□□□□ -1.77
NKX2-1P43699 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.01□□□□□ -1.77
NKX2-1P43699 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.01□□□□□ -1.77
NKX2-1P43699 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NKX2-1P43699 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NKX2-1P43699 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.01□□□□□ -1.77
NKX2-1P43699 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.01□□□□□ -1.77
NKX2-1P43699 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.01□□□□□ -1.77
NKX2-1P43699 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.01□□□□□ -1.77
NKX2-1P43699 AC025588.2-201ENST00000604851 466 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 AC104695.2-201ENST00000605056 775 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 Z99289.3-201ENST00000605586 594 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 AL353600.1-201ENST00000608148 251 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms