Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 IGHV3-63-201ENST00000518422 341 ntBASIC4.61□□□□□ -1.67
SSR1P43307 IGKV1-32-201ENST00000519290 311 ntBASIC4.61□□□□□ -1.67
SSR1P43307 MTND5P21-201ENST00000531961 522 ntBASIC4.61□□□□□ -1.67
SSR1P43307 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.61□□□□□ -1.67
SSR1P43307 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SSR1P43307 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.61□□□□□ -1.67
SSR1P43307 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.61□□□□□ -1.67
SSR1P43307 AC024940.4-201ENST00000605507 246 ntBASIC4.61□□□□□ -1.67
SSR1P43307 AC107905.1-201ENST00000616204 426 ntBASIC4.61□□□□□ -1.67
SSR1P43307 AC123768.4-201ENST00000616244 701 ntBASIC4.61□□□□□ -1.67
SSR1P43307 AC099669.2-201ENST00000616549 437 ntBASIC4.61□□□□□ -1.67
SSR1P43307 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.61□□□□□ -1.67
SSR1P43307 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.61□□□□□ -1.67
SSR1P43307 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.61□□□□□ -1.67
SSR1P43307 AC018555.1-201ENST00000567548 1980 ntBASIC4.61□□□□□ -1.67
SSR1P43307 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.61□□□□□ -1.67
SSR1P43307 DCAF13P3-201ENST00000561147 1334 ntBASIC4.61□□□□□ -1.67
SSR1P43307 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SSR1P43307 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSR1P43307 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSR1P43307 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSR1P43307 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSR1P43307 USP8P1-201ENST00000494673 3183 ntBASIC4.6□□□□□ -1.67
SSR1P43307 AC025031.4-201ENST00000621248 3271 ntBASIC4.6□□□□□ -1.67
SSR1P43307 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSR1P43307 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SSR1P43307 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SSR1P43307 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.6□□□□□ -1.67
SSR1P43307 AC136624.1-201ENST00000400791 413 ntBASIC4.6□□□□□ -1.67
SSR1P43307 RHEBP3-201ENST00000411920 351 ntBASIC4.6□□□□□ -1.67
SSR1P43307 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.6□□□□□ -1.67
SSR1P43307 AL590806.1-201ENST00000415818 853 ntBASIC4.6□□□□□ -1.67
SSR1P43307 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.6□□□□□ -1.67
SSR1P43307 AC009965.2-201ENST00000425328 970 ntBASIC4.6□□□□□ -1.67
SSR1P43307 MTCO1P52-201ENST00000433928 531 ntBASIC4.6□□□□□ -1.67
SSR1P43307 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.6□□□□□ -1.67
SSR1P43307 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.6□□□□□ -1.67
SSR1P43307 RPL7P22-201ENST00000466005 733 ntBASIC4.6□□□□□ -1.67
SSR1P43307 RPL35AP15-201ENST00000468042 339 ntBASIC4.6□□□□□ -1.67
SSR1P43307 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.6□□□□□ -1.67
SSR1P43307 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.6□□□□□ -1.67
SSR1P43307 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.6□□□□□ -1.67
SSR1P43307 IGLVIV-65-201ENST00000517313 360 ntBASIC4.6□□□□□ -1.67
SSR1P43307 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.6□□□□□ -1.67
SSR1P43307 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.6□□□□□ -1.67
SSR1P43307 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.6□□□□□ -1.67
SSR1P43307 MIR5047-201ENST00000579212 100 ntBASIC4.6□□□□□ -1.67
SSR1P43307 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.6□□□□□ -1.67
SSR1P43307 AC011477.5-201ENST00000586571 259 ntBASIC4.6□□□□□ -1.67
SSR1P43307 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
SSR1P43307 AL391597.1-201ENST00000618707 694 ntBASIC4.6□□□□□ -1.67
SSR1P43307 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.6□□□□□ -1.67
SSR1P43307 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SSR1P43307 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SSR1P43307 U6.98-201ENST00000637157 84 ntBASIC4.6□□□□□ -1.67
SSR1P43307 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.6□□□□□ -1.67
SSR1P43307 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SSR1P43307 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SSR1P43307 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SSR1P43307 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.59□□□□□ -1.67
SSR1P43307 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SSR1P43307 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.59□□□□□ -1.67
SSR1P43307 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SSR1P43307 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SSR1P43307 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.59□□□□□ -1.67
SSR1P43307 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SSR1P43307 SNORA70F-201ENST00000384142 135 ntBASIC4.59□□□□□ -1.67
SSR1P43307 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SSR1P43307 Z98941.1-201ENST00000407764 100 ntBASIC4.59□□□□□ -1.67
SSR1P43307 RN7SKP56-201ENST00000410513 331 ntBASIC4.59□□□□□ -1.67
SSR1P43307 RPS23P10-201ENST00000416185 486 ntBASIC4.59□□□□□ -1.67
SSR1P43307 UBTFL3-201ENST00000418934 1024 ntBASIC4.59□□□□□ -1.67
SSR1P43307 NPM1P24-201ENST00000428039 894 ntBASIC4.59□□□□□ -1.67
SSR1P43307 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.59□□□□□ -1.67
SSR1P43307 ARF4P2-201ENST00000430209 526 ntBASIC4.59□□□□□ -1.67
SSR1P43307 USP9YP31-201ENST00000431405 881 ntBASIC4.59□□□□□ -1.67
SSR1P43307 AL138799.3-201ENST00000438968 350 ntBASIC4.59□□□□□ -1.67
SSR1P43307 AL118496.1-201ENST00000440201 1812 ntBASIC4.59□□□□□ -1.67
SSR1P43307 AC073264.2-201ENST00000448886 166 ntBASIC4.59□□□□□ -1.67
SSR1P43307 AC000367.1-201ENST00000452711 1766 ntBASIC4.59□□□□□ -1.67
SSR1P43307 UBTFL6-201ENST00000477929 1024 ntBASIC4.59□□□□□ -1.67
SSR1P43307 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.59□□□□□ -1.67
SSR1P43307 AL049830.2-201ENST00000480072 201 ntBASIC4.59□□□□□ -1.67
SSR1P43307 RPL23AP72-201ENST00000492447 435 ntBASIC4.59□□□□□ -1.67
SSR1P43307 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.59□□□□□ -1.67
SSR1P43307 RN7SL812P-201ENST00000493791 279 ntBASIC4.59□□□□□ -1.67
SSR1P43307 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.59□□□□□ -1.67
SSR1P43307 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.59□□□□□ -1.67
SSR1P43307 AL360157.1-201ENST00000565962 87 ntBASIC4.59□□□□□ -1.67
SSR1P43307 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SSR1P43307 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.59□□□□□ -1.67
SSR1P43307 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.59□□□□□ -1.67
SSR1P43307 AC138649.5-201ENST00000637456 137 ntBASIC4.59□□□□□ -1.67
SSR1P43307 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SSR1P43307 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.59□□□□□ -1.68
SSR1P43307 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.58□□□□□ -1.68
SSR1P43307 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSR1P43307 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSR1P43307 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.58□□□□□ -1.68
SSR1P43307 GABPAP-201ENST00000419271 1356 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms