Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 MIR122-201ENST00000385044 85 ntBASIC4.22□□□□□ -1.73
SOX3P41225 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.22□□□□□ -1.73
SOX3P41225 RN7SKP167-201ENST00000411047 285 ntBASIC4.22□□□□□ -1.73
SOX3P41225 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.22□□□□□ -1.73
SOX3P41225 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.22□□□□□ -1.73
SOX3P41225 UBE2V1P9-201ENST00000414760 368 ntBASIC4.22□□□□□ -1.73
SOX3P41225 AC004690.1-201ENST00000418216 328 ntBASIC4.22□□□□□ -1.73
SOX3P41225 OR51A6P-201ENST00000418680 1004 ntBASIC4.22□□□□□ -1.73
SOX3P41225 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.22□□□□□ -1.73
SOX3P41225 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SOX3P41225 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.22□□□□□ -1.73
SOX3P41225 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.22□□□□□ -1.73
SOX3P41225 RPL23AP93-201ENST00000440847 484 ntBASIC4.22□□□□□ -1.73
SOX3P41225 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.22□□□□□ -1.73
SOX3P41225 RPL7P48-201ENST00000461513 746 ntBASIC4.22□□□□□ -1.73
SOX3P41225 RN7SL481P-201ENST00000477764 299 ntBASIC4.22□□□□□ -1.73
SOX3P41225 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
SOX3P41225 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SOX3P41225 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.22□□□□□ -1.73
SOX3P41225 IGLV3-26-201ENST00000520756 302 ntBASIC4.22□□□□□ -1.73
SOX3P41225 C1GALT1P3-201ENST00000522049 819 ntBASIC4.22□□□□□ -1.73
SOX3P41225 OR5AK3P-201ENST00000527486 1297 ntBASIC4.22□□□□□ -1.73
SOX3P41225 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
SOX3P41225 AP003717.3-201ENST00000544832 1180 ntBASIC4.22□□□□□ -1.73
SOX3P41225 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.22□□□□□ -1.73
SOX3P41225 YWHAZP1-201ENST00000556286 722 ntBASIC4.22□□□□□ -1.73
SOX3P41225 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.22□□□□□ -1.73
SOX3P41225 AC084783.1-201ENST00000565846 910 ntBASIC4.22□□□□□ -1.73
SOX3P41225 AC023825.1-201ENST00000566704 1030 ntBASIC4.22□□□□□ -1.73
SOX3P41225 AC245884.10-201ENST00000597355 337 ntBASIC4.22□□□□□ -1.73
SOX3P41225 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.22□□□□□ -1.73
SOX3P41225 AC008782.1-201ENST00000603386 430 ntBASIC4.22□□□□□ -1.73
SOX3P41225 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.22□□□□□ -1.73
SOX3P41225 AL669942.2-201ENST00000620352 697 ntBASIC4.22□□□□□ -1.73
SOX3P41225 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.22□□□□□ -1.73
SOX3P41225 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.22□□□□□ -1.73
SOX3P41225 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.22□□□□□ -1.73
SOX3P41225 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SOX3P41225 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.22□□□□□ -1.73
SOX3P41225 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.22□□□□□ -1.73
SOX3P41225 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SOX3P41225 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.22□□□□□ -1.73
SOX3P41225 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SOX3P41225 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SOX3P41225 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.22□□□□□ -1.73
SOX3P41225 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SOX3P41225 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
SOX3P41225 AL645568.2-201ENST00000432815 1337 ntBASIC4.21□□□□□ -1.73
SOX3P41225 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
SOX3P41225 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.21□□□□□ -1.73
SOX3P41225 OR56B2P-202ENST00000641377 2453 ntBASIC4.21□□□□□ -1.73
SOX3P41225 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
SOX3P41225 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SOX3P41225 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SOX3P41225 METTL21EP-201ENST00000298105 713 ntBASIC4.21□□□□□ -1.74
SOX3P41225 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SOX3P41225 IGKV7-3-201ENST00000357453 298 ntBASIC4.21□□□□□ -1.74
SOX3P41225 HMGB3P31-201ENST00000413333 595 ntBASIC4.21□□□□□ -1.74
SOX3P41225 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SOX3P41225 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.21□□□□□ -1.74
SOX3P41225 EIF4EP1-201ENST00000422311 642 ntBASIC4.21□□□□□ -1.74
SOX3P41225 RPS27AP7-201ENST00000422792 455 ntBASIC4.21□□□□□ -1.74
SOX3P41225 RPS12P10-201ENST00000427031 377 ntBASIC4.21□□□□□ -1.74
SOX3P41225 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.21□□□□□ -1.74
SOX3P41225 MTND2P2-201ENST00000434633 945 ntBASIC4.21□□□□□ -1.74
SOX3P41225 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.21□□□□□ -1.74
SOX3P41225 AL935212.3-201ENST00000450729 284 ntBASIC4.21□□□□□ -1.74
SOX3P41225 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.21□□□□□ -1.74
SOX3P41225 ISCUP1-201ENST00000454451 448 ntBASIC4.21□□□□□ -1.74
SOX3P41225 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SOX3P41225 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.21□□□□□ -1.74
SOX3P41225 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.21□□□□□ -1.74
SOX3P41225 RPL7AP10-201ENST00000481016 791 ntBASIC4.21□□□□□ -1.74
SOX3P41225 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.21□□□□□ -1.74
SOX3P41225 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.21□□□□□ -1.74
SOX3P41225 AC069306.1-201ENST00000507006 843 ntBASIC4.21□□□□□ -1.74
SOX3P41225 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.21□□□□□ -1.74
SOX3P41225 OR51K1P-201ENST00000510214 950 ntBASIC4.21□□□□□ -1.74
SOX3P41225 RNA5SP360-201ENST00000516555 118 ntBASIC4.21□□□□□ -1.74
SOX3P41225 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SOX3P41225 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.21□□□□□ -1.74
SOX3P41225 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SOX3P41225 AC100770.1-201ENST00000532310 322 ntBASIC4.21□□□□□ -1.74
SOX3P41225 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.21□□□□□ -1.74
SOX3P41225 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.21□□□□□ -1.74
SOX3P41225 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.21□□□□□ -1.74
SOX3P41225 AC018552.1-201ENST00000562099 811 ntBASIC4.21□□□□□ -1.74
SOX3P41225 CD24P2-201ENST00000565486 219 ntBASIC4.21□□□□□ -1.74
SOX3P41225 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.21□□□□□ -1.74
SOX3P41225 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.21□□□□□ -1.74
SOX3P41225 AC011492.1-201ENST00000600023 315 ntBASIC4.21□□□□□ -1.74
SOX3P41225 RPL26P30-202ENST00000602923 645 ntBASIC4.21□□□□□ -1.74
SOX3P41225 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.21□□□□□ -1.74
SOX3P41225 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.21□□□□□ -1.74
SOX3P41225 AP005019.3-201ENST00000620418 560 ntBASIC4.21□□□□□ -1.74
SOX3P41225 MIR7154-201ENST00000620673 73 ntBASIC4.21□□□□□ -1.74
SOX3P41225 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.21□□□□□ -1.74
SOX3P41225 AC132825.7-201ENST00000638744 335 ntBASIC4.21□□□□□ -1.74
SOX3P41225 AC006927.2-201ENST00000639256 389 ntBASIC4.21□□□□□ -1.74
SOX3P41225 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms