Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 MTND4LP25-201ENST00000570218 163 ntBASIC4.26□□□□□ -1.73
HMGCLP35914 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HMGCLP35914 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HMGCLP35914 OR4H6P-202ENST00000603819 340 ntBASIC4.26□□□□□ -1.73
HMGCLP35914 AC004241.3-201ENST00000611728 517 ntBASIC4.26□□□□□ -1.73
HMGCLP35914 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HMGCLP35914 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.26□□□□□ -1.73
HMGCLP35914 MIR7154-201ENST00000620673 73 ntBASIC4.26□□□□□ -1.73
HMGCLP35914 AC103798.2-201ENST00000624292 632 ntBASIC4.26□□□□□ -1.73
HMGCLP35914 AL356121.2-201ENST00000624715 780 ntBASIC4.26□□□□□ -1.73
HMGCLP35914 DDX6P1-205ENST00000441966 1436 ntBASIC4.26□□□□□ -1.73
HMGCLP35914 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.26□□□□□ -1.73
HMGCLP35914 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
HMGCLP35914 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HMGCLP35914 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.26□□□□□ -1.73
HMGCLP35914 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.26□□□□□ -1.73
HMGCLP35914 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.26□□□□□ -1.73
HMGCLP35914 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HMGCLP35914 AC010300.1-201ENST00000600671 5134 ntBASIC4.25□□□□□ -1.73
HMGCLP35914 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HMGCLP35914 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.25□□□□□ -1.73
HMGCLP35914 PNPT1P2-201ENST00000456768 2050 ntBASIC4.25□□□□□ -1.73
HMGCLP35914 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HMGCLP35914 Y_RNA.110-201ENST00000363220 99 ntBASIC4.25□□□□□ -1.73
HMGCLP35914 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.25□□□□□ -1.73
HMGCLP35914 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
HMGCLP35914 MIR1179-201ENST00000408703 91 ntBASIC4.25□□□□□ -1.73
HMGCLP35914 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.25□□□□□ -1.73
HMGCLP35914 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.25□□□□□ -1.73
HMGCLP35914 RNF19BPX-201ENST00000426224 625 ntBASIC4.25□□□□□ -1.73
HMGCLP35914 AC016712.1-201ENST00000431088 378 ntBASIC4.25□□□□□ -1.73
HMGCLP35914 ZNF965P-201ENST00000432501 817 ntBASIC4.25□□□□□ -1.73
HMGCLP35914 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.25□□□□□ -1.73
HMGCLP35914 NDUFS5P3-201ENST00000450668 321 ntBASIC4.25□□□□□ -1.73
HMGCLP35914 CLIC4P1-201ENST00000453177 535 ntBASIC4.25□□□□□ -1.73
HMGCLP35914 AL354710.1-201ENST00000453641 246 ntBASIC4.25□□□□□ -1.73
HMGCLP35914 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.25□□□□□ -1.73
HMGCLP35914 AC079804.1-201ENST00000461922 436 ntBASIC4.25□□□□□ -1.73
HMGCLP35914 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.25□□□□□ -1.73
HMGCLP35914 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.25□□□□□ -1.73
HMGCLP35914 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HMGCLP35914 AC106806.2-201ENST00000509365 500 ntBASIC4.25□□□□□ -1.73
HMGCLP35914 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.25□□□□□ -1.73
HMGCLP35914 AC034244.2-201ENST00000514668 858 ntBASIC4.25□□□□□ -1.73
HMGCLP35914 DEFB109D-201ENST00000529497 240 ntBASIC4.25□□□□□ -1.73
HMGCLP35914 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
HMGCLP35914 AC069240.1-201ENST00000548774 375 ntBASIC4.25□□□□□ -1.73
HMGCLP35914 AC018552.3-201ENST00000567416 561 ntBASIC4.25□□□□□ -1.73
HMGCLP35914 AC119501.1-201ENST00000603646 475 ntBASIC4.25□□□□□ -1.73
HMGCLP35914 AL139395.1-201ENST00000603662 160 ntBASIC4.25□□□□□ -1.73
HMGCLP35914 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.25□□□□□ -1.73
HMGCLP35914 AC092574.1-201ENST00000609771 420 ntBASIC4.25□□□□□ -1.73
HMGCLP35914 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HMGCLP35914 CR589904.2-201ENST00000612533 440 ntBASIC4.25□□□□□ -1.73
HMGCLP35914 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.25□□□□□ -1.73
HMGCLP35914 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.25□□□□□ -1.73
HMGCLP35914 RPL23AP61-201ENST00000623642 466 ntBASIC4.25□□□□□ -1.73
HMGCLP35914 AP000843.1-201ENST00000624880 701 ntBASIC4.25□□□□□ -1.73
HMGCLP35914 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.25□□□□□ -1.73
HMGCLP35914 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.25□□□□□ -1.73
HMGCLP35914 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
HMGCLP35914 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
HMGCLP35914 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.25□□□□□ -1.73
HMGCLP35914 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HMGCLP35914 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HMGCLP35914 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMGCLP35914 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HMGCLP35914 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.24□□□□□ -1.73
HMGCLP35914 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMGCLP35914 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMGCLP35914 RNU6-1279P-201ENST00000383917 103 ntBASIC4.24□□□□□ -1.73
HMGCLP35914 AL136131.1-201ENST00000406079 803 ntBASIC4.24□□□□□ -1.73
HMGCLP35914 Z86062.1-201ENST00000406773 777 ntBASIC4.24□□□□□ -1.73
HMGCLP35914 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.24□□□□□ -1.73
HMGCLP35914 RNA5SP36-201ENST00000410197 133 ntBASIC4.24□□□□□ -1.73
HMGCLP35914 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.24□□□□□ -1.73
HMGCLP35914 MTND4P24-201ENST00000424002 397 ntBASIC4.24□□□□□ -1.73
HMGCLP35914 AC093084.1-201ENST00000424233 687 ntBASIC4.24□□□□□ -1.73
HMGCLP35914 SEC63P1-201ENST00000425785 1258 ntBASIC4.24□□□□□ -1.73
HMGCLP35914 MORF4L1P7-201ENST00000426038 703 ntBASIC4.24□□□□□ -1.73
HMGCLP35914 RPL17P35-201ENST00000432217 549 ntBASIC4.24□□□□□ -1.73
HMGCLP35914 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.24□□□□□ -1.73
HMGCLP35914 AC073143.1-201ENST00000436316 395 ntBASIC4.24□□□□□ -1.73
HMGCLP35914 AL590762.3-201ENST00000436372 640 ntBASIC4.24□□□□□ -1.73
HMGCLP35914 AL691517.1-201ENST00000440833 1235 ntBASIC4.24□□□□□ -1.73
HMGCLP35914 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HMGCLP35914 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.24□□□□□ -1.73
HMGCLP35914 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.24□□□□□ -1.73
HMGCLP35914 AP002345.1-201ENST00000456493 928 ntBASIC4.24□□□□□ -1.73
HMGCLP35914 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.24□□□□□ -1.73
HMGCLP35914 AC041039.1-201ENST00000485656 536 ntBASIC4.24□□□□□ -1.73
HMGCLP35914 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.24□□□□□ -1.73
HMGCLP35914 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.24□□□□□ -1.73
HMGCLP35914 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HMGCLP35914 RNA5SP519-201ENST00000516480 119 ntBASIC4.24□□□□□ -1.73
HMGCLP35914 IGLV3-26-201ENST00000520756 302 ntBASIC4.24□□□□□ -1.73
HMGCLP35914 AC124068.1-201ENST00000563131 678 ntBASIC4.24□□□□□ -1.73
HMGCLP35914 MTND2P13-201ENST00000577438 1039 ntBASIC4.24□□□□□ -1.73
HMGCLP35914 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.24□□□□□ -1.73
HMGCLP35914 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms