Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.27□□□□□ -1.57
USP6P35125 RPS17P13-201ENST00000448974 407 ntBASIC5.27□□□□□ -1.57
USP6P35125 RPL21P11-201ENST00000461458 483 ntBASIC5.27□□□□□ -1.57
USP6P35125 RPL7P24-201ENST00000493052 752 ntBASIC5.27□□□□□ -1.57
USP6P35125 AC026427.2-201ENST00000506228 536 ntBASIC5.27□□□□□ -1.57
USP6P35125 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.27□□□□□ -1.57
USP6P35125 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
USP6P35125 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
USP6P35125 ZNF415P1-201ENST00000582279 1166 ntBASIC5.27□□□□□ -1.57
USP6P35125 AL442067.2-201ENST00000614033 363 ntBASIC5.27□□□□□ -1.57
USP6P35125 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.27□□□□□ -1.57
USP6P35125 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC5.27□□□□□ -1.57
USP6P35125 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
USP6P35125 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
USP6P35125 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
USP6P35125 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
USP6P35125 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
USP6P35125 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.26□□□□□ -1.57
USP6P35125 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.26□□□□□ -1.57
USP6P35125 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
USP6P35125 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
USP6P35125 RNA5SP51-201ENST00000364750 119 ntBASIC5.26□□□□□ -1.57
USP6P35125 SOD2P1-201ENST00000396543 562 ntBASIC5.26□□□□□ -1.57
USP6P35125 UBE2Q2P12-201ENST00000414573 204 ntBASIC5.26□□□□□ -1.57
USP6P35125 MTCO3P17-201ENST00000443775 513 ntBASIC5.26□□□□□ -1.57
USP6P35125 RANP8-201ENST00000444720 713 ntBASIC5.26□□□□□ -1.57
USP6P35125 AC005008.1-201ENST00000456151 612 ntBASIC5.26□□□□□ -1.57
USP6P35125 UBDP1-202ENST00000457888 382 ntBASIC5.26□□□□□ -1.57
USP6P35125 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.26□□□□□ -1.57
USP6P35125 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
USP6P35125 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.26□□□□□ -1.57
USP6P35125 AC084759.1-201ENST00000561168 290 ntBASIC5.26□□□□□ -1.57
USP6P35125 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.26□□□□□ -1.57
USP6P35125 MIR3922-201ENST00000585192 84 ntBASIC5.26□□□□□ -1.57
USP6P35125 AC011471.1-201ENST00000585766 187 ntBASIC5.26□□□□□ -1.57
USP6P35125 AC016957.2-201ENST00000616998 848 ntBASIC5.26□□□□□ -1.57
USP6P35125 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
USP6P35125 MAPK10-320ENST00000641462 6696 ntBASIC5.26□□□□□ -1.57
USP6P35125 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
USP6P35125 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.26□□□□□ -1.57
USP6P35125 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
USP6P35125 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC5.26□□□□□ -1.57
USP6P35125 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
USP6P35125 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.26□□□□□ -1.57
USP6P35125 AC139426.3-201ENST00000605648 2059 ntBASIC5.26□□□□□ -1.57
USP6P35125 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
USP6P35125 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
USP6P35125 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
USP6P35125 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
USP6P35125 RN7SKP74-201ENST00000362849 309 ntBASIC5.25□□□□□ -1.57
USP6P35125 RNA5SP72-201ENST00000364442 117 ntBASIC5.25□□□□□ -1.57
USP6P35125 AC007068.1-201ENST00000396690 844 ntBASIC5.25□□□□□ -1.57
USP6P35125 MAPRE1P3-201ENST00000435438 796 ntBASIC5.25□□□□□ -1.57
USP6P35125 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.25□□□□□ -1.57
USP6P35125 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.25□□□□□ -1.57
USP6P35125 AC025554.1-201ENST00000505641 188 ntBASIC5.25□□□□□ -1.57
USP6P35125 AC074250.1-201ENST00000511117 192 ntBASIC5.25□□□□□ -1.57
USP6P35125 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.25□□□□□ -1.57
USP6P35125 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
USP6P35125 RPL21P12-201ENST00000559810 515 ntBASIC5.25□□□□□ -1.57
USP6P35125 AC095038.2-201ENST00000621464 1070 ntBASIC5.25□□□□□ -1.57
USP6P35125 SYT14P1-202ENST00000600441 1448 ntBASIC5.25□□□□□ -1.57
USP6P35125 SAMMSON-213ENST00000641336 1521 ntBASIC5.25□□□□□ -1.57
USP6P35125 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.25□□□□□ -1.57
USP6P35125 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.25□□□□□ -1.57
USP6P35125 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
USP6P35125 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
USP6P35125 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.25□□□□□ -1.57
USP6P35125 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
USP6P35125 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
USP6P35125 TCP1P3-201ENST00000414406 1498 ntBASIC5.24□□□□□ -1.57
USP6P35125 NDUFB4P4-201ENST00000404822 243 ntBASIC5.24□□□□□ -1.57
USP6P35125 ATP5A1P2-201ENST00000412323 255 ntBASIC5.24□□□□□ -1.57
USP6P35125 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.24□□□□□ -1.57
USP6P35125 AC245052.5-201ENST00000416320 649 ntBASIC5.24□□□□□ -1.57
USP6P35125 AL390879.2-203ENST00000426943 1121 ntBASIC5.24□□□□□ -1.57
USP6P35125 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.24□□□□□ -1.57
USP6P35125 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.24□□□□□ -1.57
USP6P35125 CAB39P1-201ENST00000502277 460 ntBASIC5.24□□□□□ -1.57
USP6P35125 AC026782.2-201ENST00000510845 636 ntBASIC5.24□□□□□ -1.57
USP6P35125 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC5.24□□□□□ -1.57
USP6P35125 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.24□□□□□ -1.57
USP6P35125 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.24□□□□□ -1.57
USP6P35125 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.24□□□□□ -1.57
USP6P35125 AL773545.4-201ENST00000637262 310 ntBASIC5.24□□□□□ -1.57
USP6P35125 AL513478.4-201ENST00000641636 310 ntBASIC5.24□□□□□ -1.57
USP6P35125 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
USP6P35125 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
USP6P35125 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
USP6P35125 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.24□□□□□ -1.57
USP6P35125 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
USP6P35125 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
USP6P35125 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
USP6P35125 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
USP6P35125 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
USP6P35125 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC5.24□□□□□ -1.57
USP6P35125 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
USP6P35125 AP001273.1-201ENST00000624493 3152 ntBASIC5.24□□□□□ -1.57
USP6P35125 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC5.23□□□□□ -1.57
USP6P35125 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms