Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AL358794.1-201ENST00000445689 381 ntBASIC5.19□□□□□ -1.58
CIITAP33076 AC069540.1-201ENST00000446320 988 ntBASIC5.19□□□□□ -1.58
CIITAP33076 AL031584.1-201ENST00000447169 754 ntBASIC5.19□□□□□ -1.58
CIITAP33076 RPL10P17-201ENST00000453852 316 ntBASIC5.19□□□□□ -1.58
CIITAP33076 RNA5SP103-201ENST00000459503 118 ntBASIC5.19□□□□□ -1.58
CIITAP33076 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.19□□□□□ -1.58
CIITAP33076 AK3P4-201ENST00000504283 583 ntBASIC5.19□□□□□ -1.58
CIITAP33076 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.19□□□□□ -1.58
CIITAP33076 AC113420.1-201ENST00000507903 571 ntBASIC5.19□□□□□ -1.58
CIITAP33076 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC5.19□□□□□ -1.58
CIITAP33076 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.19□□□□□ -1.58
CIITAP33076 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.19□□□□□ -1.58
CIITAP33076 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.19□□□□□ -1.58
CIITAP33076 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.19□□□□□ -1.58
CIITAP33076 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.19□□□□□ -1.58
CIITAP33076 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.19□□□□□ -1.58
CIITAP33076 AC069061.3-201ENST00000582254 823 ntBASIC5.19□□□□□ -1.58
CIITAP33076 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.19□□□□□ -1.58
CIITAP33076 AC022022.2-201ENST00000602989 360 ntBASIC5.19□□□□□ -1.58
CIITAP33076 ELOCP35-201ENST00000604289 336 ntBASIC5.19□□□□□ -1.58
CIITAP33076 AL035461.2-201ENST00000619201 524 ntBASIC5.19□□□□□ -1.58
CIITAP33076 AP003497.2-201ENST00000624220 967 ntBASIC5.19□□□□□ -1.58
CIITAP33076 AP001642.1-201ENST00000624727 2117 ntBASIC5.19□□□□□ -1.58
CIITAP33076 AL049536.1-201ENST00000625043 744 ntBASIC5.19□□□□□ -1.58
CIITAP33076 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.19□□□□□ -1.58
CIITAP33076 AC083865.1-201ENST00000636634 831 ntBASIC5.19□□□□□ -1.58
CIITAP33076 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CIITAP33076 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.19□□□□□ -1.58
CIITAP33076 AC108467.2-201ENST00000617640 1597 ntBASIC5.19□□□□□ -1.58
CIITAP33076 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CIITAP33076 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CIITAP33076 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CIITAP33076 AC107068.1-201ENST00000563286 4218 ntBASIC5.19□□□□□ -1.58
CIITAP33076 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.19□□□□□ -1.58
CIITAP33076 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CIITAP33076 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CIITAP33076 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.18□□□□□ -1.58
CIITAP33076 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CIITAP33076 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CIITAP33076 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CIITAP33076 OR51H2P-202ENST00000641424 3046 ntBASIC5.18□□□□□ -1.58
CIITAP33076 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.18□□□□□ -1.58
CIITAP33076 BMS1P3-201ENST00000372011 932 ntBASIC5.18□□□□□ -1.58
CIITAP33076 HMGB1P10-201ENST00000395823 563 ntBASIC5.18□□□□□ -1.58
CIITAP33076 AP002784.2-201ENST00000397300 549 ntBASIC5.18□□□□□ -1.58
CIITAP33076 AC010385.1-201ENST00000412374 256 ntBASIC5.18□□□□□ -1.58
CIITAP33076 OSTCP5-201ENST00000425293 453 ntBASIC5.18□□□□□ -1.58
CIITAP33076 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CIITAP33076 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.18□□□□□ -1.58
CIITAP33076 AL450263.2-201ENST00000439400 589 ntBASIC5.18□□□□□ -1.58
CIITAP33076 RPS26P2-201ENST00000440331 348 ntBASIC5.18□□□□□ -1.58
CIITAP33076 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CIITAP33076 RPL6P5-201ENST00000445678 828 ntBASIC5.18□□□□□ -1.58
CIITAP33076 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.18□□□□□ -1.58
CIITAP33076 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CIITAP33076 NDUFA12P1-201ENST00000455914 406 ntBASIC5.18□□□□□ -1.58
CIITAP33076 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.18□□□□□ -1.58
CIITAP33076 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.18□□□□□ -1.58
CIITAP33076 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.18□□□□□ -1.58
CIITAP33076 AC093752.1-206ENST00000511823 336 ntBASIC5.18□□□□□ -1.58
CIITAP33076 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.18□□□□□ -1.58
CIITAP33076 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.18□□□□□ -1.58
CIITAP33076 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CIITAP33076 AC008083.2-201ENST00000546707 476 ntBASIC5.18□□□□□ -1.58
CIITAP33076 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.18□□□□□ -1.58
CIITAP33076 MTCYBP23-201ENST00000558717 1102 ntBASIC5.18□□□□□ -1.58
CIITAP33076 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC5.18□□□□□ -1.58
CIITAP33076 MIR5096-201ENST00000583713 70 ntBASIC5.18□□□□□ -1.58
CIITAP33076 AC068790.4-201ENST00000602474 263 ntBASIC5.18□□□□□ -1.58
CIITAP33076 SUMO2P14-201ENST00000604488 293 ntBASIC5.18□□□□□ -1.58
CIITAP33076 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.18□□□□□ -1.58
CIITAP33076 AL133243.1-201ENST00000614487 366 ntBASIC5.18□□□□□ -1.58
CIITAP33076 AC120349.3-201ENST00000624377 529 ntBASIC5.18□□□□□ -1.58
CIITAP33076 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.18□□□□□ -1.58
CIITAP33076 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CIITAP33076 AL355852.1-201ENST00000454081 1771 ntBASIC5.18□□□□□ -1.58
CIITAP33076 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CIITAP33076 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.18□□□□□ -1.58
CIITAP33076 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.18□□□□□ -1.58
CIITAP33076 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
CIITAP33076 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CIITAP33076 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.18□□□□□ -1.58
CIITAP33076 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.17□□□□□ -1.58
CIITAP33076 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CIITAP33076 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CIITAP33076 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CIITAP33076 CPHL1P-201ENST00000461341 3407 ntBASIC5.17□□□□□ -1.58
CIITAP33076 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.17□□□□□ -1.58
CIITAP33076 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.17□□□□□ -1.58
CIITAP33076 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CIITAP33076 MIR921-201ENST00000401133 56 ntBASIC5.17□□□□□ -1.58
CIITAP33076 AC105402.1-201ENST00000413336 545 ntBASIC5.17□□□□□ -1.58
CIITAP33076 HIGD1AP15-201ENST00000416198 280 ntBASIC5.17□□□□□ -1.58
CIITAP33076 USP9YP21-201ENST00000420603 432 ntBASIC5.17□□□□□ -1.58
CIITAP33076 AC005005.2-201ENST00000420779 380 ntBASIC5.17□□□□□ -1.58
CIITAP33076 RAD23BP1-201ENST00000421404 1227 ntBASIC5.17□□□□□ -1.58
CIITAP33076 Z74021.1-201ENST00000423610 407 ntBASIC5.17□□□□□ -1.58
CIITAP33076 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.17□□□□□ -1.58
CIITAP33076 AC093422.3-201ENST00000428506 305 ntBASIC5.17□□□□□ -1.58
CIITAP33076 RPL34P6-201ENST00000432390 345 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms