Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HOXC8P31273 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXC8P31273 AC005332.5-201ENST00000591222 2919 ntBASIC4.89□□□□□ -1.63
HOXC8P31273 MFSD8-242ENST00000641690 4199 ntBASIC4.89□□□□□ -1.63
HOXC8P31273 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.89□□□□□ -1.63
HOXC8P31273 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.89□□□□□ -1.63
HOXC8P31273 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC8P31273 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC8P31273 AC027290.2-201ENST00000623210 18662 ntBASIC4.88□□□□□ -1.63
HOXC8P31273 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC8P31273 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
HOXC8P31273 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.88□□□□□ -1.63
HOXC8P31273 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC8P31273 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC8P31273 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC8P31273 AC139769.1-204ENST00000472297 1931 ntBASIC4.88□□□□□ -1.63
HOXC8P31273 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
HOXC8P31273 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC8P31273 AL158163.1-201ENST00000603915 1649 ntBASIC4.88□□□□□ -1.63
HOXC8P31273 AL445437.1-201ENST00000623157 3087 ntBASIC4.88□□□□□ -1.63
HOXC8P31273 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXC8P31273 MIR383-201ENST00000362257 73 ntBASIC4.88□□□□□ -1.63
HOXC8P31273 RNU6-146P-201ENST00000384602 108 ntBASIC4.88□□□□□ -1.63
HOXC8P31273 MIR620-201ENST00000385232 95 ntBASIC4.88□□□□□ -1.63
HOXC8P31273 AP000357.1-201ENST00000409926 1165 ntBASIC4.88□□□□□ -1.63
HOXC8P31273 SNRPFP1-201ENST00000414761 252 ntBASIC4.88□□□□□ -1.63
HOXC8P31273 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.88□□□□□ -1.63
HOXC8P31273 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC8P31273 Z74021.1-201ENST00000423610 407 ntBASIC4.88□□□□□ -1.63
HOXC8P31273 COX6CP15-201ENST00000426313 211 ntBASIC4.88□□□□□ -1.63
HOXC8P31273 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC8P31273 BX119904.1-201ENST00000432026 348 ntBASIC4.88□□□□□ -1.63
HOXC8P31273 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.88□□□□□ -1.63
HOXC8P31273 MED6P1-201ENST00000439659 713 ntBASIC4.88□□□□□ -1.63
HOXC8P31273 TPMTP4-201ENST00000450749 678 ntBASIC4.88□□□□□ -1.63
HOXC8P31273 AC092902.1-201ENST00000486999 259 ntBASIC4.88□□□□□ -1.63
HOXC8P31273 RPL35P6-201ENST00000490024 372 ntBASIC4.88□□□□□ -1.63
HOXC8P31273 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXC8P31273 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.88□□□□□ -1.63
HOXC8P31273 AC026402.1-201ENST00000513642 170 ntBASIC4.88□□□□□ -1.63
HOXC8P31273 CIR1P1-201ENST00000524055 1133 ntBASIC4.88□□□□□ -1.63
HOXC8P31273 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC8P31273 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXC8P31273 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.88□□□□□ -1.63
HOXC8P31273 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.88□□□□□ -1.63
HOXC8P31273 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.88□□□□□ -1.63
HOXC8P31273 AL020997.2-201ENST00000602607 184 ntBASIC4.88□□□□□ -1.63
HOXC8P31273 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXC8P31273 AP001033.2-201ENST00000609701 1003 ntBASIC4.88□□□□□ -1.63
HOXC8P31273 AC116563.2-201ENST00000624751 535 ntBASIC4.88□□□□□ -1.63
HOXC8P31273 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC8P31273 MTND4P9-201ENST00000507819 1346 ntBASIC4.88□□□□□ -1.63
HOXC8P31273 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC8P31273 LARP1BP1-201ENST00000506036 1359 ntBASIC4.88□□□□□ -1.63
HOXC8P31273 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC8P31273 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC8P31273 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.88□□□□□ -1.63
HOXC8P31273 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.88□□□□□ -1.63
HOXC8P31273 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
HOXC8P31273 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
HOXC8P31273 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXC8P31273 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HOXC8P31273 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HOXC8P31273 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
HOXC8P31273 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXC8P31273 MAPK10-320ENST00000641462 6696 ntBASIC4.87□□□□□ -1.63
HOXC8P31273 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
HOXC8P31273 RNU1-83P-201ENST00000363426 164 ntBASIC4.87□□□□□ -1.63
HOXC8P31273 RN7SKP224-201ENST00000364140 325 ntBASIC4.87□□□□□ -1.63
HOXC8P31273 RNA5SP151-201ENST00000365632 117 ntBASIC4.87□□□□□ -1.63
HOXC8P31273 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXC8P31273 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXC8P31273 GCNT6-201ENST00000379591 934 ntBASIC4.87□□□□□ -1.63
HOXC8P31273 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HOXC8P31273 AL022722.2-201ENST00000402519 180 ntBASIC4.87□□□□□ -1.63
HOXC8P31273 FCF1P5-201ENST00000406490 482 ntBASIC4.87□□□□□ -1.63
HOXC8P31273 BTF3P10-201ENST00000433415 495 ntBASIC4.87□□□□□ -1.63
HOXC8P31273 PPIAP13-201ENST00000434706 478 ntBASIC4.87□□□□□ -1.63
HOXC8P31273 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXC8P31273 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXC8P31273 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HOXC8P31273 TCEA1P3-201ENST00000443005 880 ntBASIC4.87□□□□□ -1.63
HOXC8P31273 RPS27P5-201ENST00000444247 244 ntBASIC4.87□□□□□ -1.63
HOXC8P31273 PTMAP3-201ENST00000447474 330 ntBASIC4.87□□□□□ -1.63
HOXC8P31273 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXC8P31273 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HOXC8P31273 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXC8P31273 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXC8P31273 RPL23AP73-201ENST00000492507 471 ntBASIC4.87□□□□□ -1.63
HOXC8P31273 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXC8P31273 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXC8P31273 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXC8P31273 RNU6-415P-201ENST00000516252 97 ntBASIC4.87□□□□□ -1.63
HOXC8P31273 SNORA31.9-201ENST00000516429 84 ntBASIC4.87□□□□□ -1.63
HOXC8P31273 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXC8P31273 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.87□□□□□ -1.63
HOXC8P31273 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HOXC8P31273 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXC8P31273 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.87□□□□□ -1.63
HOXC8P31273 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms