Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 NXT1P1-201ENST00000458481 316 ntBASIC5.14□□□□□ -1.59
CD40P25942 PPIAP19-201ENST00000486414 492 ntBASIC5.14□□□□□ -1.59
CD40P25942 RPL17P2-201ENST00000491913 451 ntBASIC5.14□□□□□ -1.59
CD40P25942 AC108941.1-201ENST00000502853 530 ntBASIC5.14□□□□□ -1.59
CD40P25942 AC022447.3-201ENST00000506865 495 ntBASIC5.14□□□□□ -1.59
CD40P25942 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC5.14□□□□□ -1.59
CD40P25942 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC5.14□□□□□ -1.59
CD40P25942 KCTD9P2-201ENST00000512203 1013 ntBASIC5.14□□□□□ -1.59
CD40P25942 AC024589.1-201ENST00000512207 263 ntBASIC5.14□□□□□ -1.59
CD40P25942 AC034159.1-201ENST00000513885 583 ntBASIC5.14□□□□□ -1.59
CD40P25942 RNA5SP116-201ENST00000516132 98 ntBASIC5.14□□□□□ -1.59
CD40P25942 RN7SKP244-201ENST00000516513 307 ntBASIC5.14□□□□□ -1.59
CD40P25942 MED28P5-201ENST00000528254 438 ntBASIC5.14□□□□□ -1.59
CD40P25942 AC022878.1-201ENST00000530684 149 ntBASIC5.14□□□□□ -1.59
CD40P25942 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.14□□□□□ -1.59
CD40P25942 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.14□□□□□ -1.59
CD40P25942 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.14□□□□□ -1.59
CD40P25942 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.14□□□□□ -1.59
CD40P25942 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC5.14□□□□□ -1.59
CD40P25942 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.14□□□□□ -1.59
CD40P25942 TPRKBP2-201ENST00000565969 475 ntBASIC5.14□□□□□ -1.59
CD40P25942 AC090651.1-201ENST00000567865 634 ntBASIC5.14□□□□□ -1.59
CD40P25942 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CD40P25942 AC119501.1-201ENST00000603646 475 ntBASIC5.14□□□□□ -1.59
CD40P25942 AC093765.1-201ENST00000603758 881 ntBASIC5.14□□□□□ -1.59
CD40P25942 AC090948.2-201ENST00000607363 564 ntBASIC5.14□□□□□ -1.59
CD40P25942 AC109347.2-201ENST00000610220 349 ntBASIC5.14□□□□□ -1.59
CD40P25942 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.14□□□□□ -1.59
CD40P25942 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC5.14□□□□□ -1.59
CD40P25942 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.14□□□□□ -1.59
CD40P25942 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
CD40P25942 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CD40P25942 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CD40P25942 AC020656.2-201ENST00000613291 5309 ntBASIC5.14□□□□□ -1.59
CD40P25942 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.14□□□□□ -1.59
CD40P25942 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
CD40P25942 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CD40P25942 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CD40P25942 AL731532.1-201ENST00000623972 4236 ntBASIC5.14□□□□□ -1.59
CD40P25942 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CD40P25942 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CD40P25942 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CD40P25942 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CD40P25942 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CD40P25942 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CD40P25942 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.13□□□□□ -1.59
CD40P25942 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.13□□□□□ -1.59
CD40P25942 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CD40P25942 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CD40P25942 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
CD40P25942 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.13□□□□□ -1.59
CD40P25942 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.13□□□□□ -1.59
CD40P25942 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CD40P25942 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CD40P25942 AL662795.2-201ENST00000624252 3706 ntBASIC5.13□□□□□ -1.59
CD40P25942 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CD40P25942 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CD40P25942 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
CD40P25942 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.13□□□□□ -1.59
CD40P25942 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CD40P25942 RNU6-769P-201ENST00000384407 104 ntBASIC5.13□□□□□ -1.59
CD40P25942 MIR323B-201ENST00000385269 82 ntBASIC5.13□□□□□ -1.59
CD40P25942 SNORA17A-201ENST00000391185 133 ntBASIC5.13□□□□□ -1.59
CD40P25942 OR7E101P-201ENST00000400428 513 ntBASIC5.13□□□□□ -1.59
CD40P25942 Y_RNA.604-201ENST00000410574 102 ntBASIC5.13□□□□□ -1.59
CD40P25942 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC5.13□□□□□ -1.59
CD40P25942 COX6CP17-201ENST00000421389 185 ntBASIC5.13□□□□□ -1.59
CD40P25942 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.13□□□□□ -1.59
CD40P25942 AL445669.1-201ENST00000426743 755 ntBASIC5.13□□□□□ -1.59
CD40P25942 AC016027.5-201ENST00000427227 210 ntBASIC5.13□□□□□ -1.59
CD40P25942 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC5.13□□□□□ -1.59
CD40P25942 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.13□□□□□ -1.59
CD40P25942 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.13□□□□□ -1.59
CD40P25942 SDC4P-201ENST00000453285 601 ntBASIC5.13□□□□□ -1.59
CD40P25942 MTCO1P42-201ENST00000457379 726 ntBASIC5.13□□□□□ -1.59
CD40P25942 ACA64.4-201ENST00000459070 127 ntBASIC5.13□□□□□ -1.59
CD40P25942 RPL31P50-201ENST00000471002 296 ntBASIC5.13□□□□□ -1.59
CD40P25942 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC5.13□□□□□ -1.59
CD40P25942 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.13□□□□□ -1.59
CD40P25942 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.13□□□□□ -1.59
CD40P25942 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.13□□□□□ -1.59
CD40P25942 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC5.13□□□□□ -1.59
CD40P25942 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.13□□□□□ -1.59
CD40P25942 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.13□□□□□ -1.59
CD40P25942 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.13□□□□□ -1.59
CD40P25942 OR5AP1P-201ENST00000529730 940 ntBASIC5.13□□□□□ -1.59
CD40P25942 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CD40P25942 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC5.13□□□□□ -1.59
CD40P25942 AC084757.1-201ENST00000559987 490 ntBASIC5.13□□□□□ -1.59
CD40P25942 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.13□□□□□ -1.59
CD40P25942 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.13□□□□□ -1.59
CD40P25942 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.13□□□□□ -1.59
CD40P25942 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CD40P25942 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CD40P25942 BBIP1P1-201ENST00000602999 279 ntBASIC5.13□□□□□ -1.59
CD40P25942 BCRP9-201ENST00000605312 388 ntBASIC5.13□□□□□ -1.59
CD40P25942 AL139099.4-201ENST00000614802 114 ntBASIC5.13□□□□□ -1.59
CD40P25942 AP001506.1-201ENST00000615444 211 ntBASIC5.13□□□□□ -1.59
CD40P25942 AC009237.17-201ENST00000618111 748 ntBASIC5.13□□□□□ -1.59
CD40P25942 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms