Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
XPAP23025 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
XPAP23025 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
XPAP23025 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.49□□□□□ -1.53
XPAP23025 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
XPAP23025 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
XPAP23025 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.49□□□□□ -1.53
XPAP23025 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
XPAP23025 RNU4-21P-201ENST00000362802 126 ntBASIC5.49□□□□□ -1.53
XPAP23025 SNORA4.1-201ENST00000364263 144 ntBASIC5.49□□□□□ -1.53
XPAP23025 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
XPAP23025 RNU6-317P-201ENST00000384031 107 ntBASIC5.49□□□□□ -1.53
XPAP23025 HSPA8P15-201ENST00000401676 786 ntBASIC5.49□□□□□ -1.53
XPAP23025 AC004022.2-201ENST00000413824 193 ntBASIC5.49□□□□□ -1.53
XPAP23025 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.49□□□□□ -1.53
XPAP23025 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.49□□□□□ -1.53
XPAP23025 MTCO2P34-201ENST00000421994 607 ntBASIC5.49□□□□□ -1.53
XPAP23025 AL355433.1-201ENST00000422804 300 ntBASIC5.49□□□□□ -1.53
XPAP23025 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.49□□□□□ -1.53
XPAP23025 NPM1P22-201ENST00000427761 952 ntBASIC5.49□□□□□ -1.53
XPAP23025 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC5.49□□□□□ -1.53
XPAP23025 RPL12P17-201ENST00000432393 498 ntBASIC5.49□□□□□ -1.53
XPAP23025 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.49□□□□□ -1.53
XPAP23025 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC5.49□□□□□ -1.53
XPAP23025 RPS24P1-201ENST00000438550 371 ntBASIC5.49□□□□□ -1.53
XPAP23025 LINC02210-201ENST00000444561 288 ntBASIC5.49□□□□□ -1.53
XPAP23025 AL589765.3-201ENST00000446084 462 ntBASIC5.49□□□□□ -1.53
XPAP23025 AL672138.1-201ENST00000450604 1015 ntBASIC5.49□□□□□ -1.53
XPAP23025 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.49□□□□□ -1.53
XPAP23025 NDUFAF4P4-201ENST00000454883 502 ntBASIC5.49□□□□□ -1.53
XPAP23025 AC107401.1-201ENST00000503426 685 ntBASIC5.49□□□□□ -1.53
XPAP23025 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.49□□□□□ -1.53
XPAP23025 AC004069.2-201ENST00000505438 1114 ntBASIC5.49□□□□□ -1.53
XPAP23025 HMGB1P44-201ENST00000508597 572 ntBASIC5.49□□□□□ -1.53
XPAP23025 AC048346.1-201ENST00000510247 144 ntBASIC5.49□□□□□ -1.53
XPAP23025 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.49□□□□□ -1.53
XPAP23025 SNORA70.11-201ENST00000515987 138 ntBASIC5.49□□□□□ -1.53
XPAP23025 SNORA70.13-201ENST00000516116 138 ntBASIC5.49□□□□□ -1.53
XPAP23025 RNU6-885P-201ENST00000516607 104 ntBASIC5.49□□□□□ -1.53
XPAP23025 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
XPAP23025 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
XPAP23025 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.49□□□□□ -1.53
XPAP23025 AC004217.3-201ENST00000551552 878 ntBASIC5.49□□□□□ -1.53
XPAP23025 AC090751.1-201ENST00000566966 267 ntBASIC5.49□□□□□ -1.53
XPAP23025 AC012414.6-201ENST00000568241 401 ntBASIC5.49□□□□□ -1.53
XPAP23025 AC005341.1-201ENST00000571086 708 ntBASIC5.49□□□□□ -1.53
XPAP23025 ZNF415P1-201ENST00000582279 1166 ntBASIC5.49□□□□□ -1.53
XPAP23025 AC107304.1-201ENST00000604229 296 ntBASIC5.49□□□□□ -1.53
XPAP23025 AL390816.3-201ENST00000604527 1066 ntBASIC5.49□□□□□ -1.53
XPAP23025 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.49□□□□□ -1.53
XPAP23025 AC023509.5-201ENST00000617434 807 ntBASIC5.49□□□□□ -1.53
XPAP23025 AC073968.1-201ENST00000618594 637 ntBASIC5.49□□□□□ -1.53
XPAP23025 AL031667.3-201ENST00000620124 655 ntBASIC5.49□□□□□ -1.53
XPAP23025 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.49□□□□□ -1.53
XPAP23025 AC079776.5-201ENST00000641920 211 ntBASIC5.49□□□□□ -1.53
XPAP23025 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
XPAP23025 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
XPAP23025 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
XPAP23025 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.49□□□□□ -1.53
XPAP23025 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
XPAP23025 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
XPAP23025 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
XPAP23025 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.48□□□□□ -1.53
XPAP23025 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.48□□□□□ -1.53
XPAP23025 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
XPAP23025 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.48□□□□□ -1.53
XPAP23025 DDX18P4-201ENST00000511690 1966 ntBASIC5.48□□□□□ -1.53
XPAP23025 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
XPAP23025 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
XPAP23025 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
XPAP23025 AC096656.1-201ENST00000623826 1364 ntBASIC5.48□□□□□ -1.53
XPAP23025 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
XPAP23025 RNA5SP335-201ENST00000363817 110 ntBASIC5.48□□□□□ -1.53
XPAP23025 U3.10-201ENST00000364459 214 ntBASIC5.48□□□□□ -1.53
XPAP23025 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
XPAP23025 RNU6-1300P-201ENST00000391046 108 ntBASIC5.48□□□□□ -1.53
XPAP23025 AC005522.1-201ENST00000395416 346 ntBASIC5.48□□□□□ -1.53
XPAP23025 RPL23AP47-201ENST00000408017 460 ntBASIC5.48□□□□□ -1.53
XPAP23025 MIR1286-201ENST00000408112 78 ntBASIC5.48□□□□□ -1.53
XPAP23025 RN7SKP142-201ENST00000411236 328 ntBASIC5.48□□□□□ -1.53
XPAP23025 AC068533.2-201ENST00000411872 306 ntBASIC5.48□□□□□ -1.53
XPAP23025 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.48□□□□□ -1.53
XPAP23025 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.48□□□□□ -1.53
XPAP23025 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.48□□□□□ -1.53
XPAP23025 RPL12P18-201ENST00000437175 325 ntBASIC5.48□□□□□ -1.53
XPAP23025 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.48□□□□□ -1.53
XPAP23025 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.48□□□□□ -1.53
XPAP23025 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.48□□□□□ -1.53
XPAP23025 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.48□□□□□ -1.53
XPAP23025 RNU6-1218P-201ENST00000458990 108 ntBASIC5.48□□□□□ -1.53
XPAP23025 AC072039.1-201ENST00000477611 581 ntBASIC5.48□□□□□ -1.53
XPAP23025 AL161747.1-201ENST00000480068 358 ntBASIC5.48□□□□□ -1.53
XPAP23025 AC109486.1-201ENST00000486833 374 ntBASIC5.48□□□□□ -1.53
XPAP23025 RPS4XP14-201ENST00000493072 781 ntBASIC5.48□□□□□ -1.53
XPAP23025 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
XPAP23025 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.48□□□□□ -1.53
XPAP23025 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.48□□□□□ -1.53
XPAP23025 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.48□□□□□ -1.53
XPAP23025 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC5.48□□□□□ -1.53
XPAP23025 SMARCE1P4-201ENST00000523647 241 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms