Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
XRCC1P18887 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.28□□□□□ -1.72
XRCC1P18887 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.28□□□□□ -1.73
XRCC1P18887 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.27□□□□□ -1.73
XRCC1P18887 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.27□□□□□ -1.73
XRCC1P18887 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
XRCC1P18887 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
XRCC1P18887 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
XRCC1P18887 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.27□□□□□ -1.73
XRCC1P18887 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.27□□□□□ -1.73
XRCC1P18887 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
XRCC1P18887 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
XRCC1P18887 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
XRCC1P18887 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
XRCC1P18887 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
XRCC1P18887 RNA5SP307-201ENST00000362863 116 ntBASIC4.27□□□□□ -1.73
XRCC1P18887 RNU6-666P-201ENST00000363499 107 ntBASIC4.27□□□□□ -1.73
XRCC1P18887 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
XRCC1P18887 NCSTNP1-201ENST00000406229 144 ntBASIC4.27□□□□□ -1.73
XRCC1P18887 RNA5SP498-201ENST00000411342 120 ntBASIC4.27□□□□□ -1.73
XRCC1P18887 RPS23P10-201ENST00000416185 486 ntBASIC4.27□□□□□ -1.73
XRCC1P18887 RSL24D1P6-201ENST00000426934 401 ntBASIC4.27□□□□□ -1.73
XRCC1P18887 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.27□□□□□ -1.73
XRCC1P18887 ELOCP18-201ENST00000434209 337 ntBASIC4.27□□□□□ -1.73
XRCC1P18887 AL451050.1-201ENST00000450126 415 ntBASIC4.27□□□□□ -1.73
XRCC1P18887 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.27□□□□□ -1.73
XRCC1P18887 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.27□□□□□ -1.73
XRCC1P18887 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.27□□□□□ -1.73
XRCC1P18887 CDH12P2-201ENST00000504393 298 ntBASIC4.27□□□□□ -1.73
XRCC1P18887 AC139783.2-201ENST00000504847 1145 ntBASIC4.27□□□□□ -1.73
XRCC1P18887 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.27□□□□□ -1.73
XRCC1P18887 PRELID3BP5-201ENST00000508612 460 ntBASIC4.27□□□□□ -1.73
XRCC1P18887 ATP1B1P1-201ENST00000509767 915 ntBASIC4.27□□□□□ -1.73
XRCC1P18887 HNRNPKP5-201ENST00000515300 253 ntBASIC4.27□□□□□ -1.73
XRCC1P18887 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.27□□□□□ -1.73
XRCC1P18887 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.27□□□□□ -1.73
XRCC1P18887 HMGB1P46-201ENST00000520062 610 ntBASIC4.27□□□□□ -1.73
XRCC1P18887 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.27□□□□□ -1.73
XRCC1P18887 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC4.27□□□□□ -1.73
XRCC1P18887 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.27□□□□□ -1.73
XRCC1P18887 AC138701.1-201ENST00000524329 714 ntBASIC4.27□□□□□ -1.73
XRCC1P18887 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.27□□□□□ -1.73
XRCC1P18887 AC021483.2-201ENST00000567415 758 ntBASIC4.27□□□□□ -1.73
XRCC1P18887 RPL23AP97-201ENST00000568955 471 ntBASIC4.27□□□□□ -1.73
XRCC1P18887 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.27□□□□□ -1.73
XRCC1P18887 AC023575.1-201ENST00000580510 358 ntBASIC4.27□□□□□ -1.73
XRCC1P18887 OR1AB1P-201ENST00000585564 761 ntBASIC4.27□□□□□ -1.73
XRCC1P18887 MTCO3P22-201ENST00000603219 784 ntBASIC4.27□□□□□ -1.73
XRCC1P18887 AC025175.1-201ENST00000606482 759 ntBASIC4.27□□□□□ -1.73
XRCC1P18887 AC242628.1-201ENST00000606810 391 ntBASIC4.27□□□□□ -1.73
XRCC1P18887 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.27□□□□□ -1.73
XRCC1P18887 AC140479.6-201ENST00000633535 357 ntBASIC4.27□□□□□ -1.73
XRCC1P18887 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.27□□□□□ -1.73
XRCC1P18887 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
XRCC1P18887 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.27□□□□□ -1.73
XRCC1P18887 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
XRCC1P18887 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
XRCC1P18887 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
XRCC1P18887 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
XRCC1P18887 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
XRCC1P18887 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
XRCC1P18887 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.26□□□□□ -1.73
XRCC1P18887 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.26□□□□□ -1.73
XRCC1P18887 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
XRCC1P18887 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
XRCC1P18887 BX005019.1-201ENST00000561881 1810 ntBASIC4.26□□□□□ -1.73
XRCC1P18887 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
XRCC1P18887 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
XRCC1P18887 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
XRCC1P18887 RNU1-132P-201ENST00000364300 164 ntBASIC4.26□□□□□ -1.73
XRCC1P18887 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.26□□□□□ -1.73
XRCC1P18887 RN7SKP222-201ENST00000410651 315 ntBASIC4.26□□□□□ -1.73
XRCC1P18887 SNORA74C-2-201ENST00000411179 201 ntBASIC4.26□□□□□ -1.73
XRCC1P18887 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC4.26□□□□□ -1.73
XRCC1P18887 RPS3AP54-201ENST00000435535 734 ntBASIC4.26□□□□□ -1.73
XRCC1P18887 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.26□□□□□ -1.73
XRCC1P18887 RPS20P4-201ENST00000461659 355 ntBASIC4.26□□□□□ -1.73
XRCC1P18887 AC093267.1-201ENST00000489176 961 ntBASIC4.26□□□□□ -1.73
XRCC1P18887 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.26□□□□□ -1.73
XRCC1P18887 PARP4P3-201ENST00000510265 317 ntBASIC4.26□□□□□ -1.73
XRCC1P18887 AC108043.1-201ENST00000512696 574 ntBASIC4.26□□□□□ -1.73
XRCC1P18887 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
XRCC1P18887 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.26□□□□□ -1.73
XRCC1P18887 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.26□□□□□ -1.73
XRCC1P18887 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.26□□□□□ -1.73
XRCC1P18887 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.26□□□□□ -1.73
XRCC1P18887 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.26□□□□□ -1.73
XRCC1P18887 SS18L2P2-201ENST00000583960 235 ntBASIC4.26□□□□□ -1.73
XRCC1P18887 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.26□□□□□ -1.73
XRCC1P18887 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.26□□□□□ -1.73
XRCC1P18887 IPO5P1-202ENST00000600039 287 ntBASIC4.26□□□□□ -1.73
XRCC1P18887 Z98200.1-201ENST00000607298 470 ntBASIC4.26□□□□□ -1.73
XRCC1P18887 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
XRCC1P18887 AL445567.2-201ENST00000618935 498 ntBASIC4.26□□□□□ -1.73
XRCC1P18887 AL731566.2-201ENST00000618971 317 ntBASIC4.26□□□□□ -1.73
XRCC1P18887 MIR3653-201ENST00000625572 110 ntBASIC4.26□□□□□ -1.73
XRCC1P18887 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.26□□□□□ -1.73
XRCC1P18887 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
XRCC1P18887 AL359715.4-201ENST00000606629 1436 ntBASIC4.26□□□□□ -1.73
XRCC1P18887 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms