Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HMGA1P17096 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HMGA1P17096 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4□□□□□ -1.77
HMGA1P17096 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HMGA1P17096 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HMGA1P17096 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4□□□□□ -1.77
HMGA1P17096 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4□□□□□ -1.77
HMGA1P17096 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4□□□□□ -1.77
HMGA1P17096 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
HMGA1P17096 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HMGA1P17096 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3.99□□□□□ -1.77
HMGA1P17096 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HMGA1P17096 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.99□□□□□ -1.77
HMGA1P17096 RNA5SP119-201ENST00000362715 117 ntBASIC3.99□□□□□ -1.77
HMGA1P17096 SOD2P1-201ENST00000396543 562 ntBASIC3.99□□□□□ -1.77
HMGA1P17096 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.99□□□□□ -1.77
HMGA1P17096 OR51A6P-201ENST00000418680 1004 ntBASIC3.99□□□□□ -1.77
HMGA1P17096 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.99□□□□□ -1.77
HMGA1P17096 RPL5P16-201ENST00000471467 790 ntBASIC3.99□□□□□ -1.77
HMGA1P17096 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.99□□□□□ -1.77
HMGA1P17096 RN7SKP157-201ENST00000516174 282 ntBASIC3.99□□□□□ -1.77
HMGA1P17096 IGHV3-63-201ENST00000518422 341 ntBASIC3.99□□□□□ -1.77
HMGA1P17096 MYL12AP1-201ENST00000518490 515 ntBASIC3.99□□□□□ -1.77
HMGA1P17096 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.99□□□□□ -1.77
HMGA1P17096 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.99□□□□□ -1.77
HMGA1P17096 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC3.99□□□□□ -1.77
HMGA1P17096 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.99□□□□□ -1.77
HMGA1P17096 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.99□□□□□ -1.77
HMGA1P17096 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.99□□□□□ -1.77
HMGA1P17096 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HMGA1P17096 AC008739.3-201ENST00000603262 127 ntBASIC3.99□□□□□ -1.77
HMGA1P17096 AC024220.1-201ENST00000603675 484 ntBASIC3.99□□□□□ -1.77
HMGA1P17096 AC096553.1-201ENST00000605169 829 ntBASIC3.99□□□□□ -1.77
HMGA1P17096 AC012603.1-201ENST00000606424 528 ntBASIC3.99□□□□□ -1.77
HMGA1P17096 AL591424.2-201ENST00000617023 128 ntBASIC3.99□□□□□ -1.77
HMGA1P17096 AC079684.1-201ENST00000621405 437 ntBASIC3.99□□□□□ -1.77
HMGA1P17096 AP003400.2-201ENST00000624036 666 ntBASIC3.99□□□□□ -1.77
HMGA1P17096 AL034408.1-202ENST00000636088 415 ntBASIC3.99□□□□□ -1.77
HMGA1P17096 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC3.99□□□□□ -1.77
HMGA1P17096 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
HMGA1P17096 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
HMGA1P17096 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HMGA1P17096 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HMGA1P17096 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
HMGA1P17096 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.98□□□□□ -1.77
HMGA1P17096 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
HMGA1P17096 AC083843.3-201ENST00000623679 2186 ntBASIC3.98□□□□□ -1.77
HMGA1P17096 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
HMGA1P17096 RPL7P60-201ENST00000397636 735 ntBASIC3.98□□□□□ -1.77
HMGA1P17096 RNA5SP44-201ENST00000410446 133 ntBASIC3.98□□□□□ -1.77
HMGA1P17096 AC093578.1-201ENST00000415219 368 ntBASIC3.98□□□□□ -1.77
HMGA1P17096 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.98□□□□□ -1.77
HMGA1P17096 AL035423.1-201ENST00000420331 213 ntBASIC3.98□□□□□ -1.77
HMGA1P17096 AL390879.2-203ENST00000426943 1121 ntBASIC3.98□□□□□ -1.77
HMGA1P17096 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HMGA1P17096 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.98□□□□□ -1.77
HMGA1P17096 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.98□□□□□ -1.77
HMGA1P17096 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.98□□□□□ -1.77
HMGA1P17096 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.98□□□□□ -1.77
HMGA1P17096 CDH12P2-201ENST00000504393 298 ntBASIC3.98□□□□□ -1.77
HMGA1P17096 RNA5SP164-201ENST00000516533 110 ntBASIC3.98□□□□□ -1.77
HMGA1P17096 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.98□□□□□ -1.77
HMGA1P17096 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.98□□□□□ -1.77
HMGA1P17096 AC011270.1-201ENST00000558606 583 ntBASIC3.98□□□□□ -1.77
HMGA1P17096 BNIP3P22-201ENST00000593399 556 ntBASIC3.98□□□□□ -1.77
HMGA1P17096 SNORA62.6-201ENST00000606322 83 ntBASIC3.98□□□□□ -1.77
HMGA1P17096 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.98□□□□□ -1.77
HMGA1P17096 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.98□□□□□ -1.77
HMGA1P17096 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
HMGA1P17096 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HMGA1P17096 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.98□□□□□ -1.77
HMGA1P17096 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.98□□□□□ -1.77
HMGA1P17096 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
HMGA1P17096 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
HMGA1P17096 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HMGA1P17096 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HMGA1P17096 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HMGA1P17096 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
HMGA1P17096 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HMGA1P17096 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.97□□□□□ -1.77
HMGA1P17096 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC3.97□□□□□ -1.77
HMGA1P17096 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HMGA1P17096 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HMGA1P17096 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.97□□□□□ -1.77
HMGA1P17096 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HMGA1P17096 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HMGA1P17096 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HMGA1P17096 AC233289.1-201ENST00000403700 508 ntBASIC3.97□□□□□ -1.77
HMGA1P17096 TRIM60P17-201ENST00000415181 719 ntBASIC3.97□□□□□ -1.77
HMGA1P17096 CYCSP10-201ENST00000417973 294 ntBASIC3.97□□□□□ -1.77
HMGA1P17096 BX119904.1-201ENST00000432026 348 ntBASIC3.97□□□□□ -1.77
HMGA1P17096 AL050321.1-201ENST00000432363 400 ntBASIC3.97□□□□□ -1.77
HMGA1P17096 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HMGA1P17096 SNORA71B-202ENST00000439232 272 ntBASIC3.97□□□□□ -1.77
HMGA1P17096 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HMGA1P17096 AC108941.1-201ENST00000502853 530 ntBASIC3.97□□□□□ -1.77
HMGA1P17096 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.97□□□□□ -1.77
HMGA1P17096 RAC1P2-201ENST00000511164 579 ntBASIC3.97□□□□□ -1.77
HMGA1P17096 UBTFL9-201ENST00000534504 1148 ntBASIC3.97□□□□□ -1.77
HMGA1P17096 AP005901.4-201ENST00000577336 569 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms