Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
TPM1P09493 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TPM1P09493 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
TPM1P09493 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.52□□□□□ -1.69
TPM1P09493 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TPM1P09493 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TPM1P09493 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.51□□□□□ -1.69
TPM1P09493 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TPM1P09493 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.51□□□□□ -1.69
TPM1P09493 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TPM1P09493 RNU1-14P-201ENST00000362759 152 ntBASIC4.51□□□□□ -1.69
TPM1P09493 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
TPM1P09493 RPL31P52-201ENST00000407532 367 ntBASIC4.51□□□□□ -1.69
TPM1P09493 SNORA11.3-201ENST00000408471 128 ntBASIC4.51□□□□□ -1.69
TPM1P09493 RNA5SP36-201ENST00000410197 133 ntBASIC4.51□□□□□ -1.69
TPM1P09493 FAR2P2-201ENST00000413041 594 ntBASIC4.51□□□□□ -1.69
TPM1P09493 P2RY10P2-201ENST00000416730 913 ntBASIC4.51□□□□□ -1.69
TPM1P09493 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.51□□□□□ -1.69
TPM1P09493 IFNNP1-201ENST00000429219 553 ntBASIC4.51□□□□□ -1.69
TPM1P09493 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.51□□□□□ -1.69
TPM1P09493 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.51□□□□□ -1.69
TPM1P09493 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.51□□□□□ -1.69
TPM1P09493 CCRL1P1-201ENST00000449542 1053 ntBASIC4.51□□□□□ -1.69
TPM1P09493 RPL7P61-201ENST00000451721 751 ntBASIC4.51□□□□□ -1.69
TPM1P09493 MTCO3P20-201ENST00000454926 688 ntBASIC4.51□□□□□ -1.69
TPM1P09493 RN7SL93P-201ENST00000463035 293 ntBASIC4.51□□□□□ -1.69
TPM1P09493 AC010307.1-201ENST00000467206 836 ntBASIC4.51□□□□□ -1.69
TPM1P09493 RN7SL329P-201ENST00000467740 299 ntBASIC4.51□□□□□ -1.69
TPM1P09493 RN7SL354P-201ENST00000469282 294 ntBASIC4.51□□□□□ -1.69
TPM1P09493 AC011037.1-201ENST00000483964 558 ntBASIC4.51□□□□□ -1.69
TPM1P09493 AC083982.1-201ENST00000485679 344 ntBASIC4.51□□□□□ -1.69
TPM1P09493 RPL29P14-201ENST00000495837 428 ntBASIC4.51□□□□□ -1.69
TPM1P09493 RPL31P61-201ENST00000496160 376 ntBASIC4.51□□□□□ -1.69
TPM1P09493 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.51□□□□□ -1.69
TPM1P09493 AC020593.1-201ENST00000507399 299 ntBASIC4.51□□□□□ -1.69
TPM1P09493 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.51□□□□□ -1.69
TPM1P09493 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.51□□□□□ -1.69
TPM1P09493 AL109741.3-201ENST00000561748 592 ntBASIC4.51□□□□□ -1.69
TPM1P09493 RPL23AP87-202ENST00000573039 466 ntBASIC4.51□□□□□ -1.69
TPM1P09493 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.51□□□□□ -1.69
TPM1P09493 AL512624.1-201ENST00000613638 469 ntBASIC4.51□□□□□ -1.69
TPM1P09493 MIR7155-201ENST00000615925 56 ntBASIC4.51□□□□□ -1.69
TPM1P09493 AC090246.1-201ENST00000616499 426 ntBASIC4.51□□□□□ -1.69
TPM1P09493 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.51□□□□□ -1.69
TPM1P09493 SNORA11.6-201ENST00000619030 128 ntBASIC4.51□□□□□ -1.69
TPM1P09493 RARSP1-201ENST00000542842 1418 ntBASIC4.51□□□□□ -1.69
TPM1P09493 DHX40P1-201ENST00000588725 1412 ntBASIC4.51□□□□□ -1.69
TPM1P09493 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.51□□□□□ -1.69
TPM1P09493 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
TPM1P09493 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
TPM1P09493 LINC00561-201ENST00000565815 2738 ntBASIC4.51□□□□□ -1.69
TPM1P09493 ERCC6-202ENST00000374127 1782 ntBASIC4.5□□□□□ -1.69
TPM1P09493 RPS4XP5-202ENST00000449995 1334 ntBASIC4.5□□□□□ -1.69
TPM1P09493 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
TPM1P09493 AC025031.4-201ENST00000621248 3271 ntBASIC4.5□□□□□ -1.69
TPM1P09493 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
TPM1P09493 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
TPM1P09493 Z98941.1-201ENST00000407764 100 ntBASIC4.5□□□□□ -1.69
TPM1P09493 MIR1251-201ENST00000408552 70 ntBASIC4.5□□□□□ -1.69
TPM1P09493 RN7SKP235-201ENST00000410662 305 ntBASIC4.5□□□□□ -1.69
TPM1P09493 BMS1P19-201ENST00000433925 393 ntBASIC4.5□□□□□ -1.69
TPM1P09493 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.5□□□□□ -1.69
TPM1P09493 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.5□□□□□ -1.69
TPM1P09493 NIPA2P2-201ENST00000496376 1083 ntBASIC4.5□□□□□ -1.69
TPM1P09493 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TPM1P09493 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.5□□□□□ -1.69
TPM1P09493 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TPM1P09493 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.5□□□□□ -1.69
TPM1P09493 AC007599.1-201ENST00000568688 1174 ntBASIC4.5□□□□□ -1.69
TPM1P09493 AC012417.1-201ENST00000582307 1039 ntBASIC4.5□□□□□ -1.69
TPM1P09493 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
TPM1P09493 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.5□□□□□ -1.69
TPM1P09493 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.5□□□□□ -1.69
TPM1P09493 FAM27D1-201ENST00000612308 341 ntBASIC4.5□□□□□ -1.69
TPM1P09493 AC016957.2-201ENST00000616998 848 ntBASIC4.5□□□□□ -1.69
TPM1P09493 AL591424.2-201ENST00000617023 128 ntBASIC4.5□□□□□ -1.69
TPM1P09493 AC092159.4-201ENST00000624944 550 ntBASIC4.5□□□□□ -1.69
TPM1P09493 AC009452.1-201ENST00000640823 606 ntBASIC4.5□□□□□ -1.69
TPM1P09493 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.5□□□□□ -1.69
TPM1P09493 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.5□□□□□ -1.69
TPM1P09493 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TPM1P09493 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TPM1P09493 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.5□□□□□ -1.69
TPM1P09493 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TPM1P09493 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.49□□□□□ -1.69
TPM1P09493 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TPM1P09493 IPO8P1-201ENST00000455509 3109 ntBASIC4.49□□□□□ -1.69
TPM1P09493 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TPM1P09493 AC007529.1-201ENST00000418574 2178 ntBASIC4.49□□□□□ -1.69
TPM1P09493 RNU1-87P-201ENST00000363727 170 ntBASIC4.49□□□□□ -1.69
TPM1P09493 HMGN2P8-201ENST00000391458 268 ntBASIC4.49□□□□□ -1.69
TPM1P09493 AL583835.1-201ENST00000399570 407 ntBASIC4.49□□□□□ -1.69
TPM1P09493 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.49□□□□□ -1.69
TPM1P09493 TRGV6-201ENST00000417928 299 ntBASIC4.49□□□□□ -1.69
TPM1P09493 RPS26P13-201ENST00000419030 330 ntBASIC4.49□□□□□ -1.69
TPM1P09493 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.49□□□□□ -1.69
TPM1P09493 MFSD13B-201ENST00000420133 1290 ntBASIC4.49□□□□□ -1.69
TPM1P09493 SERPINA7P1-201ENST00000443077 631 ntBASIC4.49□□□□□ -1.69
TPM1P09493 RN7SL98P-201ENST00000462271 300 ntBASIC4.49□□□□□ -1.69
TPM1P09493 RN7SL738P-201ENST00000470264 297 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms