Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AL121834.1-202ENST00000404494 277 ntBASIC3.87□□□□□ -1.79
TNFP01375 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.87□□□□□ -1.79
TNFP01375 RN7SKP156-201ENST00000410308 342 ntBASIC3.87□□□□□ -1.79
TNFP01375 BMS1P19-201ENST00000433925 393 ntBASIC3.87□□□□□ -1.79
TNFP01375 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.87□□□□□ -1.79
TNFP01375 STMN1P2-201ENST00000508435 439 ntBASIC3.87□□□□□ -1.79
TNFP01375 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.87□□□□□ -1.79
TNFP01375 NDUFA5P2-201ENST00000519723 344 ntBASIC3.87□□□□□ -1.79
TNFP01375 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.87□□□□□ -1.79
TNFP01375 OR4A12P-201ENST00000530847 918 ntBASIC3.87□□□□□ -1.79
TNFP01375 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.87□□□□□ -1.79
TNFP01375 GLRXP2-201ENST00000555594 321 ntBASIC3.87□□□□□ -1.79
TNFP01375 AC112230.1-201ENST00000604342 547 ntBASIC3.87□□□□□ -1.79
TNFP01375 AL392048.1-201ENST00000613946 534 ntBASIC3.87□□□□□ -1.79
TNFP01375 LINC00901.1-201ENST00000617252 152 ntBASIC3.87□□□□□ -1.79
TNFP01375 CR392039.5-201ENST00000623201 510 ntBASIC3.87□□□□□ -1.79
TNFP01375 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC3.87□□□□□ -1.79
TNFP01375 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.87□□□□□ -1.79
TNFP01375 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TNFP01375 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
TNFP01375 HSPD1P11-201ENST00000508643 1702 ntBASIC3.87□□□□□ -1.79
TNFP01375 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
TNFP01375 OR4G1P-202ENST00000641173 1788 ntBASIC3.86□□□□□ -1.79
TNFP01375 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
TNFP01375 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
TNFP01375 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
TNFP01375 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
TNFP01375 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TNFP01375 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.86□□□□□ -1.79
TNFP01375 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.86□□□□□ -1.79
TNFP01375 AL161912.2-201ENST00000565707 3007 ntBASIC3.86□□□□□ -1.79
TNFP01375 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TNFP01375 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TNFP01375 OR4A15-201ENST00000314706 1035 ntBASIC3.86□□□□□ -1.79
TNFP01375 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TNFP01375 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.86□□□□□ -1.79
TNFP01375 ZNF602P-201ENST00000405929 924 ntBASIC3.86□□□□□ -1.79
TNFP01375 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.86□□□□□ -1.79
TNFP01375 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TNFP01375 AC013470.3-201ENST00000420252 1194 ntBASIC3.86□□□□□ -1.79
TNFP01375 AL445584.1-201ENST00000431451 330 ntBASIC3.86□□□□□ -1.79
TNFP01375 AL035246.1-201ENST00000433554 1255 ntBASIC3.86□□□□□ -1.79
TNFP01375 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.86□□□□□ -1.79
TNFP01375 MTND6P18-201ENST00000439477 513 ntBASIC3.86□□□□□ -1.79
TNFP01375 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC3.86□□□□□ -1.79
TNFP01375 CYCSP53-201ENST00000455540 265 ntBASIC3.86□□□□□ -1.79
TNFP01375 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.86□□□□□ -1.79
TNFP01375 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.86□□□□□ -1.79
TNFP01375 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.86□□□□□ -1.79
TNFP01375 AC107918.3-201ENST00000533272 382 ntBASIC3.86□□□□□ -1.79
TNFP01375 YPEL5P3-201ENST00000547227 352 ntBASIC3.86□□□□□ -1.79
TNFP01375 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.86□□□□□ -1.79
TNFP01375 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC3.86□□□□□ -1.79
TNFP01375 MIR4429-201ENST00000580105 73 ntBASIC3.86□□□□□ -1.79
TNFP01375 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.86□□□□□ -1.79
TNFP01375 AC005344.1-201ENST00000613391 459 ntBASIC3.86□□□□□ -1.79
TNFP01375 AL591424.2-201ENST00000617023 128 ntBASIC3.86□□□□□ -1.79
TNFP01375 MIR7154-201ENST00000620673 73 ntBASIC3.86□□□□□ -1.79
TNFP01375 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
TNFP01375 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
TNFP01375 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.86□□□□□ -1.79
TNFP01375 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TNFP01375 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
TNFP01375 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC3.85□□□□□ -1.79
TNFP01375 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
TNFP01375 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.85□□□□□ -1.79
TNFP01375 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.85□□□□□ -1.79
TNFP01375 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TNFP01375 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TNFP01375 AL139039.2-201ENST00000407436 479 ntBASIC3.85□□□□□ -1.79
TNFP01375 OR2X1P-201ENST00000421144 687 ntBASIC3.85□□□□□ -1.79
TNFP01375 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.85□□□□□ -1.79
TNFP01375 AC018644.1-201ENST00000429934 551 ntBASIC3.85□□□□□ -1.79
TNFP01375 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.85□□□□□ -1.79
TNFP01375 AC069285.2-201ENST00000440210 275 ntBASIC3.85□□□□□ -1.79
TNFP01375 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC3.85□□□□□ -1.79
TNFP01375 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.85□□□□□ -1.79
TNFP01375 RPL7P15-201ENST00000461190 712 ntBASIC3.85□□□□□ -1.79
TNFP01375 IGKV2-38-201ENST00000517443 247 ntBASIC3.85□□□□□ -1.79
TNFP01375 AF186190.1-201ENST00000517470 480 ntBASIC3.85□□□□□ -1.79
TNFP01375 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.85□□□□□ -1.79
TNFP01375 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.85□□□□□ -1.79
TNFP01375 NPM1P47-201ENST00000560843 856 ntBASIC3.85□□□□□ -1.79
TNFP01375 AC007599.1-201ENST00000568688 1174 ntBASIC3.85□□□□□ -1.79
TNFP01375 MTND6P33-201ENST00000571794 183 ntBASIC3.85□□□□□ -1.79
TNFP01375 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TNFP01375 BNIP3P33-201ENST00000598912 569 ntBASIC3.85□□□□□ -1.79
TNFP01375 MIR92B-201ENST00000607575 96 ntBASIC3.85□□□□□ -1.79
TNFP01375 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.85□□□□□ -1.79
TNFP01375 AF001550.2-201ENST00000636643 217 ntBASIC3.85□□□□□ -1.79
TNFP01375 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TNFP01375 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TNFP01375 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TNFP01375 AP004289.2-201ENST00000444413 1457 ntBASIC3.85□□□□□ -1.79
TNFP01375 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TNFP01375 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TNFP01375 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.84□□□□□ -1.79
TNFP01375 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TNFP01375 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TNFP01375 AC011266.1-201ENST00000624119 3569 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms