Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 RNU1-89P-201ENST00000384592 164 ntBASIC4.47□□□□□ -1.69
CTDNEP1O95476 MT-RNR1-201ENST00000389680 954 ntBASIC4.47□□□□□ -1.69
CTDNEP1O95476 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.47□□□□□ -1.69
CTDNEP1O95476 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.47□□□□□ -1.69
CTDNEP1O95476 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.47□□□□□ -1.69
CTDNEP1O95476 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.47□□□□□ -1.69
CTDNEP1O95476 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CTDNEP1O95476 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTDNEP1O95476 IFNNP1-201ENST00000429219 553 ntBASIC4.47□□□□□ -1.69
CTDNEP1O95476 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.47□□□□□ -1.69
CTDNEP1O95476 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.47□□□□□ -1.69
CTDNEP1O95476 NPM1P39-201ENST00000449818 867 ntBASIC4.47□□□□□ -1.69
CTDNEP1O95476 AC110792.1-201ENST00000491826 472 ntBASIC4.47□□□□□ -1.69
CTDNEP1O95476 TPT1P3-201ENST00000492841 512 ntBASIC4.47□□□□□ -1.69
CTDNEP1O95476 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.47□□□□□ -1.69
CTDNEP1O95476 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.47□□□□□ -1.69
CTDNEP1O95476 OR4A12P-201ENST00000530847 918 ntBASIC4.47□□□□□ -1.69
CTDNEP1O95476 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.47□□□□□ -1.69
CTDNEP1O95476 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.47□□□□□ -1.69
CTDNEP1O95476 AC015726.1-201ENST00000602353 681 ntBASIC4.47□□□□□ -1.69
CTDNEP1O95476 MIR486-1-201ENST00000612171 68 ntBASIC4.47□□□□□ -1.69
CTDNEP1O95476 LINC02471-203ENST00000641941 4752 ntBASIC4.47□□□□□ -1.69
CTDNEP1O95476 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTDNEP1O95476 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTDNEP1O95476 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CTDNEP1O95476 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CTDNEP1O95476 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.46□□□□□ -1.7
CTDNEP1O95476 ATP5F1P4-201ENST00000397288 746 ntBASIC4.46□□□□□ -1.7
CTDNEP1O95476 HLFP1-201ENST00000402375 499 ntBASIC4.46□□□□□ -1.7
CTDNEP1O95476 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CTDNEP1O95476 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.46□□□□□ -1.7
CTDNEP1O95476 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.46□□□□□ -1.7
CTDNEP1O95476 COX6CP17-201ENST00000421389 185 ntBASIC4.46□□□□□ -1.7
CTDNEP1O95476 RPL21P109-201ENST00000422213 475 ntBASIC4.46□□□□□ -1.7
CTDNEP1O95476 OR8F1P-201ENST00000425243 930 ntBASIC4.46□□□□□ -1.7
CTDNEP1O95476 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CTDNEP1O95476 RPL21P89-201ENST00000444021 467 ntBASIC4.46□□□□□ -1.7
CTDNEP1O95476 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.46□□□□□ -1.7
CTDNEP1O95476 NUTF2P7-201ENST00000453086 375 ntBASIC4.46□□□□□ -1.7
CTDNEP1O95476 RNA5SP143-201ENST00000516936 115 ntBASIC4.46□□□□□ -1.7
CTDNEP1O95476 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.46□□□□□ -1.7
CTDNEP1O95476 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CTDNEP1O95476 HIGD1AP5-201ENST00000529959 259 ntBASIC4.46□□□□□ -1.7
CTDNEP1O95476 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.46□□□□□ -1.7
CTDNEP1O95476 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.46□□□□□ -1.7
CTDNEP1O95476 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
CTDNEP1O95476 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.46□□□□□ -1.7
CTDNEP1O95476 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC4.46□□□□□ -1.7
CTDNEP1O95476 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.46□□□□□ -1.7
CTDNEP1O95476 AC119501.1-201ENST00000603646 475 ntBASIC4.46□□□□□ -1.7
CTDNEP1O95476 AL008729.2-201ENST00000606393 473 ntBASIC4.46□□□□□ -1.7
CTDNEP1O95476 AL645927.2-201ENST00000618350 349 ntBASIC4.46□□□□□ -1.7
CTDNEP1O95476 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.46□□□□□ -1.7
CTDNEP1O95476 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
CTDNEP1O95476 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.46□□□□□ -1.7
CTDNEP1O95476 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.46□□□□□ -1.7
CTDNEP1O95476 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CTDNEP1O95476 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.7
CTDNEP1O95476 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.46□□□□□ -1.7
CTDNEP1O95476 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CTDNEP1O95476 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CTDNEP1O95476 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CTDNEP1O95476 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CTDNEP1O95476 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CTDNEP1O95476 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.46□□□□□ -1.7
CTDNEP1O95476 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CTDNEP1O95476 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTDNEP1O95476 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CTDNEP1O95476 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
CTDNEP1O95476 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTDNEP1O95476 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.45□□□□□ -1.7
CTDNEP1O95476 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CTDNEP1O95476 SNORA70.2-201ENST00000364506 135 ntBASIC4.45□□□□□ -1.7
CTDNEP1O95476 AL672167.2-201ENST00000377164 879 ntBASIC4.45□□□□□ -1.7
CTDNEP1O95476 RAB9AP4-201ENST00000415230 609 ntBASIC4.45□□□□□ -1.7
CTDNEP1O95476 BTG3P1-201ENST00000435859 716 ntBASIC4.45□□□□□ -1.7
CTDNEP1O95476 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTDNEP1O95476 RPS6P2-201ENST00000454208 705 ntBASIC4.45□□□□□ -1.7
CTDNEP1O95476 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CTDNEP1O95476 EIF4EP5-201ENST00000528228 640 ntBASIC4.45□□□□□ -1.7
CTDNEP1O95476 AC107918.3-201ENST00000533272 382 ntBASIC4.45□□□□□ -1.7
CTDNEP1O95476 AC120057.2-201ENST00000571520 271 ntBASIC4.45□□□□□ -1.7
CTDNEP1O95476 AC136624.4-201ENST00000573044 370 ntBASIC4.45□□□□□ -1.7
CTDNEP1O95476 AC068790.5-201ENST00000602741 355 ntBASIC4.45□□□□□ -1.7
CTDNEP1O95476 AL137849.1-201ENST00000604767 169 ntBASIC4.45□□□□□ -1.7
CTDNEP1O95476 BRDTP1-201ENST00000605735 677 ntBASIC4.45□□□□□ -1.7
CTDNEP1O95476 SNORA62.6-201ENST00000606322 83 ntBASIC4.45□□□□□ -1.7
CTDNEP1O95476 AL139089.1-201ENST00000620372 975 ntBASIC4.45□□□□□ -1.7
CTDNEP1O95476 FP236240.3-201ENST00000623061 327 ntBASIC4.45□□□□□ -1.7
CTDNEP1O95476 AL359715.5-201ENST00000623431 443 ntBASIC4.45□□□□□ -1.7
CTDNEP1O95476 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.45□□□□□ -1.7
CTDNEP1O95476 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.45□□□□□ -1.7
CTDNEP1O95476 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
CTDNEP1O95476 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.45□□□□□ -1.7
CTDNEP1O95476 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTDNEP1O95476 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTDNEP1O95476 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CTDNEP1O95476 FAM35DP-201ENST00000323387 2712 ntBASIC4.44□□□□□ -1.7
CTDNEP1O95476 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CTDNEP1O95476 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 165.8 ms