Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.03□□□□□ -1.76
SEMA3DO95025 FTH1P9-201ENST00000513251 355 ntBASIC4.03□□□□□ -1.76
SEMA3DO95025 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
SEMA3DO95025 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.03□□□□□ -1.76
SEMA3DO95025 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.03□□□□□ -1.76
SEMA3DO95025 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.03□□□□□ -1.76
SEMA3DO95025 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.03□□□□□ -1.76
SEMA3DO95025 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
SEMA3DO95025 AC063950.1-201ENST00000552036 308 ntBASIC4.03□□□□□ -1.76
SEMA3DO95025 AC027176.2-201ENST00000559166 746 ntBASIC4.03□□□□□ -1.76
SEMA3DO95025 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SEMA3DO95025 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SEMA3DO95025 HMGB1P50-201ENST00000605814 607 ntBASIC4.03□□□□□ -1.76
SEMA3DO95025 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.03□□□□□ -1.76
SEMA3DO95025 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.03□□□□□ -1.76
SEMA3DO95025 AL139254.3-201ENST00000641097 674 ntBASIC4.03□□□□□ -1.76
SEMA3DO95025 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.03□□□□□ -1.76
SEMA3DO95025 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SEMA3DO95025 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.03□□□□□ -1.76
SEMA3DO95025 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.03□□□□□ -1.77
SEMA3DO95025 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SEMA3DO95025 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SEMA3DO95025 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SEMA3DO95025 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
SEMA3DO95025 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
SEMA3DO95025 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SEMA3DO95025 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SEMA3DO95025 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SEMA3DO95025 RNA5SP509-201ENST00000364577 119 ntBASIC4.02□□□□□ -1.77
SEMA3DO95025 RNA5SP36-201ENST00000410197 133 ntBASIC4.02□□□□□ -1.77
SEMA3DO95025 RPS3AP54-201ENST00000435535 734 ntBASIC4.02□□□□□ -1.77
SEMA3DO95025 RPL23AP46-201ENST00000438548 490 ntBASIC4.02□□□□□ -1.77
SEMA3DO95025 ACTR3P2-201ENST00000439585 1257 ntBASIC4.02□□□□□ -1.77
SEMA3DO95025 CBX1P1-201ENST00000440184 427 ntBASIC4.02□□□□□ -1.77
SEMA3DO95025 CYCSP42-201ENST00000450823 238 ntBASIC4.02□□□□□ -1.77
SEMA3DO95025 RPL5P32-201ENST00000454085 879 ntBASIC4.02□□□□□ -1.77
SEMA3DO95025 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.02□□□□□ -1.77
SEMA3DO95025 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.02□□□□□ -1.77
SEMA3DO95025 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.02□□□□□ -1.77
SEMA3DO95025 RN7SL738P-201ENST00000470264 297 ntBASIC4.02□□□□□ -1.77
SEMA3DO95025 SYT14P1-201ENST00000481459 721 ntBASIC4.02□□□□□ -1.77
SEMA3DO95025 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.02□□□□□ -1.77
SEMA3DO95025 AC008958.1-201ENST00000511047 682 ntBASIC4.02□□□□□ -1.77
SEMA3DO95025 RNA5SP49-201ENST00000516450 115 ntBASIC4.02□□□□□ -1.77
SEMA3DO95025 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.02□□□□□ -1.77
SEMA3DO95025 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.02□□□□□ -1.77
SEMA3DO95025 UBTFL9-201ENST00000534504 1148 ntBASIC4.02□□□□□ -1.77
SEMA3DO95025 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.02□□□□□ -1.77
SEMA3DO95025 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.02□□□□□ -1.77
SEMA3DO95025 AC068714.1-201ENST00000559623 800 ntBASIC4.02□□□□□ -1.77
SEMA3DO95025 AL360157.1-201ENST00000565962 87 ntBASIC4.02□□□□□ -1.77
SEMA3DO95025 FAM106CP-201ENST00000582212 507 ntBASIC4.02□□□□□ -1.77
SEMA3DO95025 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.02□□□□□ -1.77
SEMA3DO95025 AC009303.3-201ENST00000591103 736 ntBASIC4.02□□□□□ -1.77
SEMA3DO95025 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.02□□□□□ -1.77
SEMA3DO95025 AC064801.1-201ENST00000612025 407 ntBASIC4.02□□□□□ -1.77
SEMA3DO95025 AP003497.2-201ENST00000624220 967 ntBASIC4.02□□□□□ -1.77
SEMA3DO95025 AP005264.7-201ENST00000625003 745 ntBASIC4.02□□□□□ -1.77
SEMA3DO95025 CFTRP2-201ENST00000634304 199 ntBASIC4.02□□□□□ -1.77
SEMA3DO95025 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SEMA3DO95025 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
SEMA3DO95025 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
SEMA3DO95025 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SEMA3DO95025 AC139713.2-214ENST00000642059 1811 ntBASIC4.02□□□□□ -1.77
SEMA3DO95025 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.02□□□□□ -1.77
SEMA3DO95025 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SEMA3DO95025 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SEMA3DO95025 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.02□□□□□ -1.77
SEMA3DO95025 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.02□□□□□ -1.77
SEMA3DO95025 AC017007.4-201ENST00000503353 1352 ntBASIC4.02□□□□□ -1.77
SEMA3DO95025 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.01□□□□□ -1.77
SEMA3DO95025 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.01□□□□□ -1.77
SEMA3DO95025 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
SEMA3DO95025 AL139811.1-201ENST00000424779 2299 ntBASIC4.01□□□□□ -1.77
SEMA3DO95025 AL627171.1-201ENST00000618845 1308 ntBASIC4.01□□□□□ -1.77
SEMA3DO95025 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SEMA3DO95025 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SEMA3DO95025 AC027287.1-201ENST00000553115 1453 ntBASIC4.01□□□□□ -1.77
SEMA3DO95025 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SEMA3DO95025 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SEMA3DO95025 AL035696.2-201ENST00000407941 709 ntBASIC4.01□□□□□ -1.77
SEMA3DO95025 AC011933.1-201ENST00000413334 321 ntBASIC4.01□□□□□ -1.77
SEMA3DO95025 RPL26P29-201ENST00000415623 438 ntBASIC4.01□□□□□ -1.77
SEMA3DO95025 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SEMA3DO95025 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SEMA3DO95025 AL355994.1-201ENST00000424379 260 ntBASIC4.01□□□□□ -1.77
SEMA3DO95025 AL732292.1-201ENST00000426692 226 ntBASIC4.01□□□□□ -1.77
SEMA3DO95025 AC068287.1-201ENST00000430283 295 ntBASIC4.01□□□□□ -1.77
SEMA3DO95025 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.01□□□□□ -1.77
SEMA3DO95025 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.01□□□□□ -1.77
SEMA3DO95025 RPL36AP13-201ENST00000457490 317 ntBASIC4.01□□□□□ -1.77
SEMA3DO95025 AC116533.1-201ENST00000459748 321 ntBASIC4.01□□□□□ -1.77
SEMA3DO95025 AC011276.1-201ENST00000469688 323 ntBASIC4.01□□□□□ -1.77
SEMA3DO95025 RN7SL303P-201ENST00000469773 251 ntBASIC4.01□□□□□ -1.77
SEMA3DO95025 RPS23P1-201ENST00000491662 432 ntBASIC4.01□□□□□ -1.77
SEMA3DO95025 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.01□□□□□ -1.77
SEMA3DO95025 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SEMA3DO95025 KCTD9P2-201ENST00000512203 1013 ntBASIC4.01□□□□□ -1.77
SEMA3DO95025 RNA5SP519-201ENST00000516480 119 ntBASIC4.01□□□□□ -1.77
SEMA3DO95025 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms