Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
CLDN3O15551 RN7SKP182-201ENST00000410772 298 ntBASIC4.63□□□□□ -1.67
CLDN3O15551 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.63□□□□□ -1.67
CLDN3O15551 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.63□□□□□ -1.67
CLDN3O15551 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.63□□□□□ -1.67
CLDN3O15551 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.63□□□□□ -1.67
CLDN3O15551 RSL24D1P6-201ENST00000426934 401 ntBASIC4.63□□□□□ -1.67
CLDN3O15551 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.63□□□□□ -1.67
CLDN3O15551 BTF3P10-201ENST00000433415 495 ntBASIC4.63□□□□□ -1.67
CLDN3O15551 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CLDN3O15551 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.63□□□□□ -1.67
CLDN3O15551 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CLDN3O15551 EEF1A1P1-201ENST00000447052 739 ntBASIC4.63□□□□□ -1.67
CLDN3O15551 RPL5P30-201ENST00000465511 891 ntBASIC4.63□□□□□ -1.67
CLDN3O15551 RPS29P19-201ENST00000479709 171 ntBASIC4.63□□□□□ -1.67
CLDN3O15551 AC093770.1-201ENST00000511559 571 ntBASIC4.63□□□□□ -1.67
CLDN3O15551 AC108120.2-201ENST00000512973 294 ntBASIC4.63□□□□□ -1.67
CLDN3O15551 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.63□□□□□ -1.67
CLDN3O15551 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC4.63□□□□□ -1.67
CLDN3O15551 HMGB1P19-201ENST00000517578 577 ntBASIC4.63□□□□□ -1.67
CLDN3O15551 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.63□□□□□ -1.67
CLDN3O15551 MRPL49P2-201ENST00000521066 465 ntBASIC4.63□□□□□ -1.67
CLDN3O15551 AC067805.1-201ENST00000559344 470 ntBASIC4.63□□□□□ -1.67
CLDN3O15551 AC023158.1-201ENST00000561632 1025 ntBASIC4.63□□□□□ -1.67
CLDN3O15551 MTATP6P25-201ENST00000574491 261 ntBASIC4.63□□□□□ -1.67
CLDN3O15551 AC245128.3-201ENST00000594721 748 ntBASIC4.63□□□□□ -1.67
CLDN3O15551 AL133247.2-201ENST00000603236 482 ntBASIC4.63□□□□□ -1.67
CLDN3O15551 AC090525.3-201ENST00000605601 189 ntBASIC4.63□□□□□ -1.67
CLDN3O15551 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.63□□□□□ -1.67
CLDN3O15551 AL133243.3-201ENST00000617415 3004 ntBASIC4.63□□□□□ -1.67
CLDN3O15551 LARP1BP1-201ENST00000506036 1359 ntBASIC4.63□□□□□ -1.67
CLDN3O15551 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CLDN3O15551 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLDN3O15551 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLDN3O15551 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLDN3O15551 GSTM3P2-201ENST00000412746 530 ntBASIC4.62□□□□□ -1.67
CLDN3O15551 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLDN3O15551 COX6B1P7-201ENST00000430845 235 ntBASIC4.62□□□□□ -1.67
CLDN3O15551 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.62□□□□□ -1.67
CLDN3O15551 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.62□□□□□ -1.67
CLDN3O15551 RPL7P48-201ENST00000461513 746 ntBASIC4.62□□□□□ -1.67
CLDN3O15551 AC079804.1-201ENST00000461922 436 ntBASIC4.62□□□□□ -1.67
CLDN3O15551 MTND6P6-201ENST00000478031 263 ntBASIC4.62□□□□□ -1.67
CLDN3O15551 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.62□□□□□ -1.67
CLDN3O15551 PPBPP1-201ENST00000510807 373 ntBASIC4.62□□□□□ -1.67
CLDN3O15551 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLDN3O15551 AC099522.1-202ENST00000514718 367 ntBASIC4.62□□□□□ -1.67
CLDN3O15551 RNU6-760P-201ENST00000516078 97 ntBASIC4.62□□□□□ -1.67
CLDN3O15551 RNU6-889P-201ENST00000517189 103 ntBASIC4.62□□□□□ -1.67
CLDN3O15551 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.62□□□□□ -1.67
CLDN3O15551 AC022882.1-201ENST00000532142 501 ntBASIC4.62□□□□□ -1.67
CLDN3O15551 DYNLL1P4-201ENST00000549314 266 ntBASIC4.62□□□□□ -1.67
CLDN3O15551 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.62□□□□□ -1.67
CLDN3O15551 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.62□□□□□ -1.67
CLDN3O15551 AC068446.3-201ENST00000555285 382 ntBASIC4.62□□□□□ -1.67
CLDN3O15551 GLRXP2-201ENST00000555594 321 ntBASIC4.62□□□□□ -1.67
CLDN3O15551 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.62□□□□□ -1.67
CLDN3O15551 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.62□□□□□ -1.67
CLDN3O15551 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLDN3O15551 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.62□□□□□ -1.67
CLDN3O15551 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLDN3O15551 AC079298.2-201ENST00000623885 459 ntBASIC4.62□□□□□ -1.67
CLDN3O15551 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.62□□□□□ -1.67
CLDN3O15551 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.62□□□□□ -1.67
CLDN3O15551 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLDN3O15551 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.62□□□□□ -1.67
CLDN3O15551 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLDN3O15551 AL445437.1-201ENST00000623157 3087 ntBASIC4.62□□□□□ -1.67
CLDN3O15551 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.62□□□□□ -1.67
CLDN3O15551 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
CLDN3O15551 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLDN3O15551 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN3O15551 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.61□□□□□ -1.67
CLDN3O15551 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN3O15551 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CLDN3O15551 MIR1179-201ENST00000408703 91 ntBASIC4.61□□□□□ -1.67
CLDN3O15551 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.61□□□□□ -1.67
CLDN3O15551 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.61□□□□□ -1.67
CLDN3O15551 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.61□□□□□ -1.67
CLDN3O15551 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.61□□□□□ -1.67
CLDN3O15551 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN3O15551 RPL23AP12-201ENST00000467573 473 ntBASIC4.61□□□□□ -1.67
CLDN3O15551 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.61□□□□□ -1.67
CLDN3O15551 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
CLDN3O15551 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN3O15551 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.61□□□□□ -1.67
CLDN3O15551 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.61□□□□□ -1.67
CLDN3O15551 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.61□□□□□ -1.67
CLDN3O15551 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.61□□□□□ -1.67
CLDN3O15551 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.61□□□□□ -1.67
CLDN3O15551 AC023043.4-201ENST00000612081 449 ntBASIC4.61□□□□□ -1.67
CLDN3O15551 AC139769.3-201ENST00000618383 175 ntBASIC4.61□□□□□ -1.67
CLDN3O15551 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.61□□□□□ -1.67
CLDN3O15551 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.61□□□□□ -1.67
CLDN3O15551 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN3O15551 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN3O15551 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.61□□□□□ -1.67
CLDN3O15551 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.61□□□□□ -1.67
CLDN3O15551 CYP1D1P-201ENST00000416662 1433 ntBASIC4.61□□□□□ -1.67
CLDN3O15551 AC091046.3-201ENST00000631455 1574 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms