Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.11□□□□□ -1.75
TRBV4-1A0A0J9YWV2 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.11□□□□□ -1.75
TRBV4-1A0A0J9YWV2 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.11□□□□□ -1.75
TRBV4-1A0A0J9YWV2 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.11□□□□□ -1.75
TRBV4-1A0A0J9YWV2 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.11□□□□□ -1.75
TRBV4-1A0A0J9YWV2 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.11□□□□□ -1.75
TRBV4-1A0A0J9YWV2 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.11□□□□□ -1.75
TRBV4-1A0A0J9YWV2 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.11□□□□□ -1.75
TRBV4-1A0A0J9YWV2 VN1R87P-201ENST00000596706 487 ntBASIC4.11□□□□□ -1.75
TRBV4-1A0A0J9YWV2 ELOCP34-201ENST00000604436 327 ntBASIC4.11□□□□□ -1.75
TRBV4-1A0A0J9YWV2 Z98200.1-201ENST00000607298 470 ntBASIC4.11□□□□□ -1.75
TRBV4-1A0A0J9YWV2 AL121652.1-201ENST00000608851 448 ntBASIC4.11□□□□□ -1.75
TRBV4-1A0A0J9YWV2 AC243654.2-201ENST00000612843 443 ntBASIC4.11□□□□□ -1.75
TRBV4-1A0A0J9YWV2 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.11□□□□□ -1.75
TRBV4-1A0A0J9YWV2 MIR6853-201ENST00000619642 74 ntBASIC4.11□□□□□ -1.75
TRBV4-1A0A0J9YWV2 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.11□□□□□ -1.75
TRBV4-1A0A0J9YWV2 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.11□□□□□ -1.75
TRBV4-1A0A0J9YWV2 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.11□□□□□ -1.75
TRBV4-1A0A0J9YWV2 AC105074.1-201ENST00000623380 3095 ntBASIC4.11□□□□□ -1.75
TRBV4-1A0A0J9YWV2 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TRBV4-1A0A0J9YWV2 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRBV4-1A0A0J9YWV2 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.11□□□□□ -1.75
TRBV4-1A0A0J9YWV2 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
TRBV4-1A0A0J9YWV2 AC100871.1-201ENST00000507871 1456 ntBASIC4.11□□□□□ -1.75
TRBV4-1A0A0J9YWV2 MTCO1P11-201ENST00000429111 1528 ntBASIC4.11□□□□□ -1.75
TRBV4-1A0A0J9YWV2 LINC01109-201ENST00000603837 3081 ntBASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 NSRP1P1-201ENST00000444067 1693 ntBASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 AL590240.1-201ENST00000334118 313 ntBASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 RNU1-15P-201ENST00000353977 144 ntBASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 RNA5SP52-201ENST00000362448 134 ntBASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 SNORA51.8-201ENST00000384234 132 ntBASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 DNAJC19P6-201ENST00000401853 280 ntBASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 BX510359.2-201ENST00000417920 305 ntBASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 AL590609.2-201ENST00000421430 368 ntBASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 PPIAP20-201ENST00000449839 135 ntBASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 AL354710.1-201ENST00000453641 246 ntBASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 AC079804.1-201ENST00000461922 436 ntBASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 RPL7P16-201ENST00000479738 738 ntBASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 RN7SL808P-201ENST00000496066 299 ntBASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 RPL23AP97-201ENST00000568955 471 ntBASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 MIR3667-201ENST00000581025 74 ntBASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 AL022067.1-201ENST00000602426 454 ntBASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 AL512782.1-201ENST00000603093 364 ntBASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 MIR6826-201ENST00000617808 98 ntBASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 AC073055.1-201ENST00000456901 1621 ntBASIC4.1□□□□□ -1.75
TRBV4-1A0A0J9YWV2 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRBV4-1A0A0J9YWV2 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
TRBV4-1A0A0J9YWV2 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRBV4-1A0A0J9YWV2 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRBV4-1A0A0J9YWV2 RNA5SP507-201ENST00000363603 121 ntBASIC4.09□□□□□ -1.75
TRBV4-1A0A0J9YWV2 SNORA71.2-201ENST00000364941 134 ntBASIC4.09□□□□□ -1.75
TRBV4-1A0A0J9YWV2 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.09□□□□□ -1.75
TRBV4-1A0A0J9YWV2 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRBV4-1A0A0J9YWV2 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRBV4-1A0A0J9YWV2 SNORA74C-2-201ENST00000411179 201 ntBASIC4.09□□□□□ -1.75
TRBV4-1A0A0J9YWV2 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.09□□□□□ -1.75
TRBV4-1A0A0J9YWV2 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.09□□□□□ -1.75
TRBV4-1A0A0J9YWV2 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms