Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RTCBQ9Y3I0 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RTCBQ9Y3I0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC24.49■■□□□ 1.51
RTCBQ9Y3I0 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC24.49■■□□□ 1.51
RTCBQ9Y3I0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RTCBQ9Y3I0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC24.49■■□□□ 1.51
RTCBQ9Y3I0 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RTCBQ9Y3I0 AC092119.3-201ENST00000612618 583 ntBASIC24.49■■□□□ 1.51
RTCBQ9Y3I0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RTCBQ9Y3I0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RTCBQ9Y3I0 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RTCBQ9Y3I0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
RTCBQ9Y3I0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
RTCBQ9Y3I0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC24.49■■□□□ 1.51
RTCBQ9Y3I0 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RTCBQ9Y3I0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RTCBQ9Y3I0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC24.49■■□□□ 1.51
RTCBQ9Y3I0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC24.49■■□□□ 1.51
RTCBQ9Y3I0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
RTCBQ9Y3I0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
RTCBQ9Y3I0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RTCBQ9Y3I0 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RTCBQ9Y3I0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RTCBQ9Y3I0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RTCBQ9Y3I0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RTCBQ9Y3I0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RTCBQ9Y3I0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC24.48■■□□□ 1.51
RTCBQ9Y3I0 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RTCBQ9Y3I0 MOK-225ENST00000522867 1883 ntTSL 5 BASIC24.48■■□□□ 1.51
RTCBQ9Y3I0 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RTCBQ9Y3I0 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
RTCBQ9Y3I0 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
RTCBQ9Y3I0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC24.48■■□□□ 1.51
RTCBQ9Y3I0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC24.48■■□□□ 1.51
RTCBQ9Y3I0 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RTCBQ9Y3I0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RTCBQ9Y3I0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RTCBQ9Y3I0 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
RTCBQ9Y3I0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
RTCBQ9Y3I0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RTCBQ9Y3I0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
RTCBQ9Y3I0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RTCBQ9Y3I0 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RTCBQ9Y3I0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
RTCBQ9Y3I0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RTCBQ9Y3I0 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC24.47■■□□□ 1.51
RTCBQ9Y3I0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC24.47■■□□□ 1.51
RTCBQ9Y3I0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
RTCBQ9Y3I0 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RTCBQ9Y3I0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RTCBQ9Y3I0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC24.47■■□□□ 1.51
RTCBQ9Y3I0 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
RTCBQ9Y3I0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RTCBQ9Y3I0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC24.46■■□□□ 1.51
RTCBQ9Y3I0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RTCBQ9Y3I0 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RTCBQ9Y3I0 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RTCBQ9Y3I0 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RTCBQ9Y3I0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC24.46■■□□□ 1.51
RTCBQ9Y3I0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC24.46■■□□□ 1.51
RTCBQ9Y3I0 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC24.46■■□□□ 1.51
RTCBQ9Y3I0 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RTCBQ9Y3I0 AC246785.2-201ENST00000432512 513 ntBASIC24.46■■□□□ 1.51
RTCBQ9Y3I0 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC24.46■■□□□ 1.51
RTCBQ9Y3I0 PRR29-207ENST00000580752 458 ntTSL 3 BASIC24.46■■□□□ 1.51
RTCBQ9Y3I0 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC24.46■■□□□ 1.51
RTCBQ9Y3I0 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RTCBQ9Y3I0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RTCBQ9Y3I0 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
RTCBQ9Y3I0 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
RTCBQ9Y3I0 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
RTCBQ9Y3I0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RTCBQ9Y3I0 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RTCBQ9Y3I0 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RTCBQ9Y3I0 HBZP1-201ENST00000354915 429 ntBASIC24.45■■□□□ 1.5
RTCBQ9Y3I0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RTCBQ9Y3I0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC24.45■■□□□ 1.5
RTCBQ9Y3I0 MIR3652-201ENST00000579335 131 ntBASIC24.45■■□□□ 1.5
RTCBQ9Y3I0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RTCBQ9Y3I0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
RTCBQ9Y3I0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RTCBQ9Y3I0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
RTCBQ9Y3I0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC24.44■■□□□ 1.5
RTCBQ9Y3I0 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RTCBQ9Y3I0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
RTCBQ9Y3I0 GOLGA2P11-201ENST00000562660 1621 ntBASIC24.44■■□□□ 1.5
RTCBQ9Y3I0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RTCBQ9Y3I0 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RTCBQ9Y3I0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC24.44■■□□□ 1.5
RTCBQ9Y3I0 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RTCBQ9Y3I0 BUB3-202ENST00000368859 667 ntTSL 3 BASIC24.44■■□□□ 1.5
RTCBQ9Y3I0 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC24.44■■□□□ 1.5
RTCBQ9Y3I0 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RTCBQ9Y3I0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC24.44■■□□□ 1.5
RTCBQ9Y3I0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC24.44■■□□□ 1.5
RTCBQ9Y3I0 MIR4674-201ENST00000582457 87 ntBASIC24.44■■□□□ 1.5
RTCBQ9Y3I0 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RTCBQ9Y3I0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
RTCBQ9Y3I0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC24.44■■□□□ 1.5
RTCBQ9Y3I0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms