Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.25■□□□□ 0.35
CLCF1Q9UBD9 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CLCF1Q9UBD9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CLCF1Q9UBD9 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCF1Q9UBD9 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.25■□□□□ 0.35
CLCF1Q9UBD9 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.25■□□□□ 0.35
CLCF1Q9UBD9 AC096733.2-201ENST00000609937 1394 ntBASIC17.25■□□□□ 0.35
CLCF1Q9UBD9 LINC01568-207ENST00000641790 1380 ntBASIC17.25■□□□□ 0.35
CLCF1Q9UBD9 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCF1Q9UBD9 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CLCF1Q9UBD9 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCF1Q9UBD9 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.24■□□□□ 0.35
CLCF1Q9UBD9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCF1Q9UBD9 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCF1Q9UBD9 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.24■□□□□ 0.35
CLCF1Q9UBD9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.24■□□□□ 0.35
CLCF1Q9UBD9 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCF1Q9UBD9 LINC01465-201ENST00000408887 1940 ntBASIC17.24■□□□□ 0.35
CLCF1Q9UBD9 RCN1P1-201ENST00000400413 996 ntBASIC17.24■□□□□ 0.35
CLCF1Q9UBD9 CRYGFP-201ENST00000418459 633 ntBASIC17.24■□□□□ 0.35
CLCF1Q9UBD9 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.24■□□□□ 0.35
CLCF1Q9UBD9 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.24■□□□□ 0.35
CLCF1Q9UBD9 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
CLCF1Q9UBD9 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.24■□□□□ 0.35
CLCF1Q9UBD9 C2orf69P3-201ENST00000565542 1120 ntBASIC17.24■□□□□ 0.35
CLCF1Q9UBD9 SLC25A1P4-201ENST00000567977 778 ntBASIC17.24■□□□□ 0.35
CLCF1Q9UBD9 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.24■□□□□ 0.35
CLCF1Q9UBD9 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLCF1Q9UBD9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLCF1Q9UBD9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.24■□□□□ 0.35
CLCF1Q9UBD9 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.24■□□□□ 0.35
CLCF1Q9UBD9 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCF1Q9UBD9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCF1Q9UBD9 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCF1Q9UBD9 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CLCF1Q9UBD9 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCF1Q9UBD9 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCF1Q9UBD9 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCF1Q9UBD9 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLCF1Q9UBD9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCF1Q9UBD9 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCF1Q9UBD9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCF1Q9UBD9 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCF1Q9UBD9 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CLCF1Q9UBD9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.23■□□□□ 0.35
CLCF1Q9UBD9 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.23■□□□□ 0.35
CLCF1Q9UBD9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
CLCF1Q9UBD9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CLCF1Q9UBD9 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLCF1Q9UBD9 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CLCF1Q9UBD9 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.23■□□□□ 0.35
CLCF1Q9UBD9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.23■□□□□ 0.35
CLCF1Q9UBD9 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.23■□□□□ 0.35
CLCF1Q9UBD9 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.23■□□□□ 0.35
CLCF1Q9UBD9 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCF1Q9UBD9 KRT18P21-201ENST00000515767 1272 ntBASIC17.23■□□□□ 0.35
CLCF1Q9UBD9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.23■□□□□ 0.35
CLCF1Q9UBD9 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCF1Q9UBD9 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.23■□□□□ 0.35
CLCF1Q9UBD9 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.22■□□□□ 0.35
CLCF1Q9UBD9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCF1Q9UBD9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCF1Q9UBD9 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCF1Q9UBD9 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCF1Q9UBD9 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLCF1Q9UBD9 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLCF1Q9UBD9 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCF1Q9UBD9 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CLCF1Q9UBD9 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CLCF1Q9UBD9 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCF1Q9UBD9 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CLCF1Q9UBD9 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.22■□□□□ 0.35
CLCF1Q9UBD9 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCF1Q9UBD9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CLCF1Q9UBD9 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCF1Q9UBD9 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
CLCF1Q9UBD9 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCF1Q9UBD9 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCF1Q9UBD9 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCF1Q9UBD9 MFAP1P1-201ENST00000442257 1255 ntBASIC17.22■□□□□ 0.35
CLCF1Q9UBD9 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCF1Q9UBD9 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCF1Q9UBD9 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCF1Q9UBD9 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CLCF1Q9UBD9 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CLCF1Q9UBD9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCF1Q9UBD9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCF1Q9UBD9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCF1Q9UBD9 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCF1Q9UBD9 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLCF1Q9UBD9 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCF1Q9UBD9 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.22■□□□□ 0.35
CLCF1Q9UBD9 KRT18P22-201ENST00000402024 1347 ntBASIC17.21■□□□□ 0.35
CLCF1Q9UBD9 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.21■□□□□ 0.35
CLCF1Q9UBD9 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CLCF1Q9UBD9 TSPY14P-201ENST00000303979 915 ntBASIC17.21■□□□□ 0.35
CLCF1Q9UBD9 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CLCF1Q9UBD9 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CLCF1Q9UBD9 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.21■□□□□ 0.35
CLCF1Q9UBD9 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms