Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.4■□□□□ 0.7
LRFN3Q9BTN0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRFN3Q9BTN0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRFN3Q9BTN0 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRFN3Q9BTN0 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
LRFN3Q9BTN0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.4■□□□□ 0.7
LRFN3Q9BTN0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.4■□□□□ 0.7
LRFN3Q9BTN0 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.4■□□□□ 0.7
LRFN3Q9BTN0 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.4■□□□□ 0.7
LRFN3Q9BTN0 AC139887.3-201ENST00000568585 713 ntBASIC19.4■□□□□ 0.7
LRFN3Q9BTN0 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRFN3Q9BTN0 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
LRFN3Q9BTN0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRFN3Q9BTN0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRFN3Q9BTN0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRFN3Q9BTN0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRFN3Q9BTN0 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRFN3Q9BTN0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRFN3Q9BTN0 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
LRFN3Q9BTN0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LRFN3Q9BTN0 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
LRFN3Q9BTN0 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LRFN3Q9BTN0 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.39■□□□□ 0.7
LRFN3Q9BTN0 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
LRFN3Q9BTN0 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRFN3Q9BTN0 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRFN3Q9BTN0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRFN3Q9BTN0 MIR662-201ENST00000384847 95 ntBASIC19.39■□□□□ 0.69
LRFN3Q9BTN0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.39■□□□□ 0.69
LRFN3Q9BTN0 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRFN3Q9BTN0 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.39■□□□□ 0.69
LRFN3Q9BTN0 AL160286.2-201ENST00000567150 934 ntBASIC19.39■□□□□ 0.69
LRFN3Q9BTN0 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
LRFN3Q9BTN0 RNF126P1-202ENST00000569893 925 ntBASIC19.39■□□□□ 0.69
LRFN3Q9BTN0 MIR3687-2-201ENST00000577708 61 ntBASIC19.39■□□□□ 0.69
LRFN3Q9BTN0 MIR3687-1-201ENST00000614492 61 ntBASIC19.39■□□□□ 0.69
LRFN3Q9BTN0 AC134684.3-201ENST00000641758 218 ntBASIC19.39■□□□□ 0.69
LRFN3Q9BTN0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRFN3Q9BTN0 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRFN3Q9BTN0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRFN3Q9BTN0 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRFN3Q9BTN0 AL117328.2-201ENST00000624617 1940 ntBASIC19.39■□□□□ 0.69
LRFN3Q9BTN0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.39■□□□□ 0.69
LRFN3Q9BTN0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRFN3Q9BTN0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LRFN3Q9BTN0 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRFN3Q9BTN0 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LRFN3Q9BTN0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
LRFN3Q9BTN0 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRFN3Q9BTN0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
LRFN3Q9BTN0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LRFN3Q9BTN0 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.38■□□□□ 0.69
LRFN3Q9BTN0 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.38■□□□□ 0.69
LRFN3Q9BTN0 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.38■□□□□ 0.69
LRFN3Q9BTN0 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LRFN3Q9BTN0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.38■□□□□ 0.69
LRFN3Q9BTN0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.38■□□□□ 0.69
LRFN3Q9BTN0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LRFN3Q9BTN0 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.38■□□□□ 0.69
LRFN3Q9BTN0 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.38■□□□□ 0.69
LRFN3Q9BTN0 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
LRFN3Q9BTN0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.38■□□□□ 0.69
LRFN3Q9BTN0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRFN3Q9BTN0 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.38■□□□□ 0.69
LRFN3Q9BTN0 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.38■□□□□ 0.69
LRFN3Q9BTN0 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LRFN3Q9BTN0 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
LRFN3Q9BTN0 AC079602.3-201ENST00000623931 403 ntBASIC19.38■□□□□ 0.69
LRFN3Q9BTN0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRFN3Q9BTN0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRFN3Q9BTN0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRFN3Q9BTN0 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRFN3Q9BTN0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
LRFN3Q9BTN0 AC233702.3-201ENST00000578656 1387 ntBASIC19.37■□□□□ 0.69
LRFN3Q9BTN0 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRFN3Q9BTN0 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LRFN3Q9BTN0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
LRFN3Q9BTN0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.37■□□□□ 0.69
LRFN3Q9BTN0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LRFN3Q9BTN0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.37■□□□□ 0.69
LRFN3Q9BTN0 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRFN3Q9BTN0 HLA-F-220ENST00000434407 884 ntBASIC19.37■□□□□ 0.69
LRFN3Q9BTN0 CYMP-203ENST00000474680 1263 ntBASIC19.37■□□□□ 0.69
LRFN3Q9BTN0 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.37■□□□□ 0.69
LRFN3Q9BTN0 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
LRFN3Q9BTN0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
LRFN3Q9BTN0 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.37■□□□□ 0.69
LRFN3Q9BTN0 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.37■□□□□ 0.69
LRFN3Q9BTN0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.37■□□□□ 0.69
LRFN3Q9BTN0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRFN3Q9BTN0 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRFN3Q9BTN0 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRFN3Q9BTN0 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.37■□□□□ 0.69
LRFN3Q9BTN0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.37■□□□□ 0.69
LRFN3Q9BTN0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRFN3Q9BTN0 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRFN3Q9BTN0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRFN3Q9BTN0 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRFN3Q9BTN0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.36■□□□□ 0.69
LRFN3Q9BTN0 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms