Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHDQ96IW2 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SHDQ96IW2 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.6■□□□□ 0.73
SHDQ96IW2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHDQ96IW2 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHDQ96IW2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.6■□□□□ 0.73
SHDQ96IW2 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.6■□□□□ 0.73
SHDQ96IW2 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHDQ96IW2 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.6■□□□□ 0.73
SHDQ96IW2 AC034232.1-201ENST00000506026 1064 ntBASIC19.6■□□□□ 0.73
SHDQ96IW2 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.6■□□□□ 0.73
SHDQ96IW2 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHDQ96IW2 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHDQ96IW2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SHDQ96IW2 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SHDQ96IW2 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHDQ96IW2 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHDQ96IW2 AIRN-201ENST00000601203 4374 ntBASIC19.6■□□□□ 0.73
SHDQ96IW2 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SHDQ96IW2 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.59■□□□□ 0.73
SHDQ96IW2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHDQ96IW2 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHDQ96IW2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SHDQ96IW2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHDQ96IW2 PKD1P6-201ENST00000343738 4769 ntBASIC19.59■□□□□ 0.73
SHDQ96IW2 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.59■□□□□ 0.73
SHDQ96IW2 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHDQ96IW2 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.59■□□□□ 0.73
SHDQ96IW2 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SHDQ96IW2 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHDQ96IW2 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.59■□□□□ 0.73
SHDQ96IW2 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SHDQ96IW2 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.59■□□□□ 0.73
SHDQ96IW2 FAAHP1-202ENST00000446499 1238 ntBASIC19.59■□□□□ 0.73
SHDQ96IW2 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.59■□□□□ 0.73
SHDQ96IW2 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.59■□□□□ 0.73
SHDQ96IW2 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SHDQ96IW2 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.59■□□□□ 0.73
SHDQ96IW2 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHDQ96IW2 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SHDQ96IW2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.59■□□□□ 0.73
SHDQ96IW2 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.59■□□□□ 0.73
SHDQ96IW2 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
SHDQ96IW2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHDQ96IW2 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SHDQ96IW2 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SHDQ96IW2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
SHDQ96IW2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.58■□□□□ 0.73
SHDQ96IW2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.58■□□□□ 0.73
SHDQ96IW2 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHDQ96IW2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHDQ96IW2 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.58■□□□□ 0.72
SHDQ96IW2 AL645929.1-201ENST00000420084 975 ntBASIC19.58■□□□□ 0.72
SHDQ96IW2 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.58■□□□□ 0.72
SHDQ96IW2 AC246785.2-201ENST00000432512 513 ntBASIC19.58■□□□□ 0.72
SHDQ96IW2 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.58■□□□□ 0.72
SHDQ96IW2 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.58■□□□□ 0.72
SHDQ96IW2 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.58■□□□□ 0.72
SHDQ96IW2 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.58■□□□□ 0.72
SHDQ96IW2 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SHDQ96IW2 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHDQ96IW2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SHDQ96IW2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHDQ96IW2 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.58■□□□□ 0.72
SHDQ96IW2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHDQ96IW2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHDQ96IW2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHDQ96IW2 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.57■□□□□ 0.72
SHDQ96IW2 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.57■□□□□ 0.72
SHDQ96IW2 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.57■□□□□ 0.72
SHDQ96IW2 SPDYE15P-201ENST00000424157 909 ntBASIC19.57■□□□□ 0.72
SHDQ96IW2 TSPY21P-201ENST00000433481 731 ntBASIC19.57■□□□□ 0.72
SHDQ96IW2 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.57■□□□□ 0.72
SHDQ96IW2 TSPY23P-201ENST00000440136 739 ntBASIC19.57■□□□□ 0.72
SHDQ96IW2 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.57■□□□□ 0.72
SHDQ96IW2 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.57■□□□□ 0.72
SHDQ96IW2 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.57■□□□□ 0.72
SHDQ96IW2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.57■□□□□ 0.72
SHDQ96IW2 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SHDQ96IW2 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHDQ96IW2 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SHDQ96IW2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.57■□□□□ 0.72
SHDQ96IW2 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHDQ96IW2 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHDQ96IW2 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
SHDQ96IW2 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SHDQ96IW2 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.57■□□□□ 0.72
SHDQ96IW2 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHDQ96IW2 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHDQ96IW2 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SHDQ96IW2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHDQ96IW2 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.56■□□□□ 0.72
SHDQ96IW2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
SHDQ96IW2 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.56■□□□□ 0.72
SHDQ96IW2 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHDQ96IW2 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SHDQ96IW2 HBZP1-201ENST00000354915 429 ntBASIC19.56■□□□□ 0.72
SHDQ96IW2 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHDQ96IW2 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SHDQ96IW2 FDX1P1-201ENST00000449115 551 ntBASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms