Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 AC007322.1-201ENST00000426983 750 ntBASIC18.61■□□□□ 0.57
VPS33AQ96AX1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 OR10C1-204ENST00000622521 1039 ntBASIC18.61■□□□□ 0.57
VPS33AQ96AX1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
VPS33AQ96AX1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VPS33AQ96AX1 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
VPS33AQ96AX1 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
VPS33AQ96AX1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
VPS33AQ96AX1 AC116351.2-201ENST00000606540 1585 ntBASIC18.6■□□□□ 0.57
VPS33AQ96AX1 AC007613.1-201ENST00000572811 2597 ntBASIC18.6■□□□□ 0.57
VPS33AQ96AX1 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.6■□□□□ 0.57
VPS33AQ96AX1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VPS33AQ96AX1 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
VPS33AQ96AX1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VPS33AQ96AX1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.6■□□□□ 0.57
VPS33AQ96AX1 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
VPS33AQ96AX1 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VPS33AQ96AX1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VPS33AQ96AX1 AC026271.2-201ENST00000428091 497 ntBASIC18.6■□□□□ 0.57
VPS33AQ96AX1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.6■□□□□ 0.57
VPS33AQ96AX1 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.6■□□□□ 0.57
VPS33AQ96AX1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.6■□□□□ 0.57
VPS33AQ96AX1 BID-214ENST00000617586 542 ntTSL 5 BASIC18.6■□□□□ 0.57
VPS33AQ96AX1 AC231657.2-201ENST00000624556 255 ntBASIC18.6■□□□□ 0.57
VPS33AQ96AX1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.6■□□□□ 0.57
VPS33AQ96AX1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VPS33AQ96AX1 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VPS33AQ96AX1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VPS33AQ96AX1 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
VPS33AQ96AX1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VPS33AQ96AX1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VPS33AQ96AX1 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.59■□□□□ 0.57
VPS33AQ96AX1 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS33AQ96AX1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.59■□□□□ 0.57
VPS33AQ96AX1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
VPS33AQ96AX1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS33AQ96AX1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS33AQ96AX1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
VPS33AQ96AX1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VPS33AQ96AX1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.59■□□□□ 0.57
VPS33AQ96AX1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS33AQ96AX1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS33AQ96AX1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.59■□□□□ 0.57
VPS33AQ96AX1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.59■□□□□ 0.57
VPS33AQ96AX1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.59■□□□□ 0.57
VPS33AQ96AX1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.59■□□□□ 0.57
VPS33AQ96AX1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.59■□□□□ 0.57
VPS33AQ96AX1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS33AQ96AX1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS33AQ96AX1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS33AQ96AX1 AC104581.1-202ENST00000635932 2618 ntBASIC18.59■□□□□ 0.57
VPS33AQ96AX1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS33AQ96AX1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS33AQ96AX1 AC006333.2-201ENST00000607957 2099 ntBASIC18.59■□□□□ 0.57
VPS33AQ96AX1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VPS33AQ96AX1 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.59■□□□□ 0.57
VPS33AQ96AX1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.59■□□□□ 0.57
VPS33AQ96AX1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.59■□□□□ 0.57
VPS33AQ96AX1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VPS33AQ96AX1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.58■□□□□ 0.57
VPS33AQ96AX1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
VPS33AQ96AX1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VPS33AQ96AX1 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
VPS33AQ96AX1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
VPS33AQ96AX1 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.58■□□□□ 0.57
VPS33AQ96AX1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
VPS33AQ96AX1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
VPS33AQ96AX1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.58■□□□□ 0.57
VPS33AQ96AX1 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.58■□□□□ 0.57
VPS33AQ96AX1 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
VPS33AQ96AX1 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
VPS33AQ96AX1 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
VPS33AQ96AX1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
VPS33AQ96AX1 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.57
VPS33AQ96AX1 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms