Protein–RNA interactions for Protein: Q93009

USP7, Ubiquitin carboxyl-terminal hydrolase 7, humanhuman

Predictions only

Length 1,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP7Q93009 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP7Q93009 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
USP7Q93009 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP7Q93009 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP7Q93009 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP7Q93009 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP7Q93009 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP7Q93009 HLA-G-202ENST00000376815 851 ntBASIC19.14■□□□□ 0.65
USP7Q93009 HLA-G-203ENST00000376818 1127 ntBASIC19.14■□□□□ 0.65
USP7Q93009 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP7Q93009 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.14■□□□□ 0.65
USP7Q93009 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.14■□□□□ 0.65
USP7Q93009 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.14■□□□□ 0.65
USP7Q93009 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP7Q93009 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP7Q93009 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP7Q93009 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
USP7Q93009 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.14■□□□□ 0.65
USP7Q93009 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.14■□□□□ 0.65
USP7Q93009 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.14■□□□□ 0.65
USP7Q93009 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.14■□□□□ 0.65
USP7Q93009 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP7Q93009 HTR7P1-201ENST00000538670 1336 ntBASIC19.14■□□□□ 0.65
USP7Q93009 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP7Q93009 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP7Q93009 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP7Q93009 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP7Q93009 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
USP7Q93009 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
USP7Q93009 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.14■□□□□ 0.65
USP7Q93009 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP7Q93009 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
USP7Q93009 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.13■□□□□ 0.65
USP7Q93009 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP7Q93009 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP7Q93009 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP7Q93009 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP7Q93009 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
USP7Q93009 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP7Q93009 AP001271.2-201ENST00000624018 1556 ntBASIC19.13■□□□□ 0.65
USP7Q93009 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.13■□□□□ 0.65
USP7Q93009 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.13■□□□□ 0.65
USP7Q93009 AC124283.5-201ENST00000624661 1809 ntBASIC19.13■□□□□ 0.65
USP7Q93009 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.13■□□□□ 0.65
USP7Q93009 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP7Q93009 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP7Q93009 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP7Q93009 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP7Q93009 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.12■□□□□ 0.65
USP7Q93009 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP7Q93009 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.12■□□□□ 0.65
USP7Q93009 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.12■□□□□ 0.65
USP7Q93009 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.12■□□□□ 0.65
USP7Q93009 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
USP7Q93009 NBPF21P-201ENST00000425093 1451 ntBASIC19.12■□□□□ 0.65
USP7Q93009 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP7Q93009 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP7Q93009 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.12■□□□□ 0.65
USP7Q93009 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP7Q93009 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
USP7Q93009 AL355355.2-201ENST00000442321 338 ntBASIC19.12■□□□□ 0.65
USP7Q93009 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP7Q93009 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.12■□□□□ 0.65
USP7Q93009 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.12■□□□□ 0.65
USP7Q93009 AP003071.4-201ENST00000562276 1284 ntBASIC19.12■□□□□ 0.65
USP7Q93009 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.12■□□□□ 0.65
USP7Q93009 AF186192.3-201ENST00000583427 947 ntBASIC19.12■□□□□ 0.65
USP7Q93009 AC097493.4-201ENST00000641197 219 ntBASIC19.12■□□□□ 0.65
USP7Q93009 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP7Q93009 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP7Q93009 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
USP7Q93009 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.12■□□□□ 0.65
USP7Q93009 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP7Q93009 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP7Q93009 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
USP7Q93009 AC138932.1-201ENST00000534164 6830 ntBASIC19.11■□□□□ 0.65
USP7Q93009 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP7Q93009 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP7Q93009 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP7Q93009 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP7Q93009 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP7Q93009 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.11■□□□□ 0.65
USP7Q93009 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP7Q93009 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.11■□□□□ 0.65
USP7Q93009 KRT16P5-201ENST00000455284 522 ntBASIC19.11■□□□□ 0.65
USP7Q93009 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
USP7Q93009 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP7Q93009 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.11■□□□□ 0.65
USP7Q93009 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
USP7Q93009 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
USP7Q93009 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP7Q93009 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP7Q93009 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.11■□□□□ 0.65
USP7Q93009 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
USP7Q93009 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP7Q93009 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP7Q93009 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP7Q93009 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP7Q93009 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
USP7Q93009 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms