Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
USP6NLQ92738 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.99■■□□□ 1.11
USP6NLQ92738 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.99■■□□□ 1.11
USP6NLQ92738 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
USP6NLQ92738 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
USP6NLQ92738 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.98■■□□□ 1.11
USP6NLQ92738 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
USP6NLQ92738 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
USP6NLQ92738 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.98■■□□□ 1.11
USP6NLQ92738 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
USP6NLQ92738 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.98■■□□□ 1.11
USP6NLQ92738 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.98■■□□□ 1.11
USP6NLQ92738 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.98■■□□□ 1.11
USP6NLQ92738 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
USP6NLQ92738 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
USP6NLQ92738 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
USP6NLQ92738 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.98■■□□□ 1.11
USP6NLQ92738 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
USP6NLQ92738 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
USP6NLQ92738 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.98■■□□□ 1.11
USP6NLQ92738 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.98■■□□□ 1.11
USP6NLQ92738 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
USP6NLQ92738 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP6NLQ92738 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP6NLQ92738 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.97■■□□□ 1.11
USP6NLQ92738 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
USP6NLQ92738 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP6NLQ92738 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP6NLQ92738 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP6NLQ92738 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP6NLQ92738 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.97■■□□□ 1.11
USP6NLQ92738 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.97■■□□□ 1.11
USP6NLQ92738 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.97■■□□□ 1.11
USP6NLQ92738 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.97■■□□□ 1.11
USP6NLQ92738 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.97■■□□□ 1.11
USP6NLQ92738 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.97■■□□□ 1.11
USP6NLQ92738 VENTXP5-201ENST00000523979 775 ntBASIC21.97■■□□□ 1.11
USP6NLQ92738 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC21.97■■□□□ 1.11
USP6NLQ92738 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.97■■□□□ 1.11
USP6NLQ92738 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
USP6NLQ92738 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.97■■□□□ 1.11
USP6NLQ92738 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP6NLQ92738 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.97■■□□□ 1.11
USP6NLQ92738 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.97■■□□□ 1.11
USP6NLQ92738 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
USP6NLQ92738 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.96■■□□□ 1.11
USP6NLQ92738 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.96■■□□□ 1.11
USP6NLQ92738 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
USP6NLQ92738 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
USP6NLQ92738 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.96■■□□□ 1.11
USP6NLQ92738 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
USP6NLQ92738 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
USP6NLQ92738 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
USP6NLQ92738 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.96■■□□□ 1.11
USP6NLQ92738 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
USP6NLQ92738 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
USP6NLQ92738 AC112907.2-201ENST00000448639 330 ntBASIC21.96■■□□□ 1.11
USP6NLQ92738 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.96■■□□□ 1.11
USP6NLQ92738 ZNF444P1-201ENST00000559497 298 ntBASIC21.96■■□□□ 1.11
USP6NLQ92738 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.96■■□□□ 1.11
USP6NLQ92738 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.96■■□□□ 1.11
USP6NLQ92738 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
USP6NLQ92738 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
USP6NLQ92738 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
USP6NLQ92738 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.96■■□□□ 1.11
USP6NLQ92738 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.96■■□□□ 1.11
USP6NLQ92738 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.96■■□□□ 1.11
USP6NLQ92738 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
USP6NLQ92738 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
USP6NLQ92738 AP001271.2-201ENST00000624018 1556 ntBASIC21.95■■□□□ 1.11
USP6NLQ92738 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.95■■□□□ 1.1
USP6NLQ92738 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP6NLQ92738 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP6NLQ92738 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP6NLQ92738 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP6NLQ92738 STARP1-201ENST00000397973 869 ntBASIC21.95■■□□□ 1.1
USP6NLQ92738 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.95■■□□□ 1.1
USP6NLQ92738 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.95■■□□□ 1.1
USP6NLQ92738 NEK4P2-201ENST00000580004 1012 ntBASIC21.95■■□□□ 1.1
USP6NLQ92738 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC21.95■■□□□ 1.1
USP6NLQ92738 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP6NLQ92738 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.95■■□□□ 1.1
USP6NLQ92738 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP6NLQ92738 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP6NLQ92738 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP6NLQ92738 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP6NLQ92738 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.95■■□□□ 1.1
USP6NLQ92738 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.95■■□□□ 1.1
USP6NLQ92738 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.95■■□□□ 1.1
USP6NLQ92738 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
USP6NLQ92738 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
USP6NLQ92738 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.94■■□□□ 1.1
USP6NLQ92738 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.94■■□□□ 1.1
USP6NLQ92738 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
USP6NLQ92738 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
USP6NLQ92738 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
USP6NLQ92738 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
USP6NLQ92738 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.94■■□□□ 1.1
USP6NLQ92738 FEM1AP1-201ENST00000431297 1995 ntBASIC21.94■■□□□ 1.1
USP6NLQ92738 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms