Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC23.05■■□□□ 1.28
SH3RF3Q8TEJ3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC23.05■■□□□ 1.28
SH3RF3Q8TEJ3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
SH3RF3Q8TEJ3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC23.04■■□□□ 1.28
SH3RF3Q8TEJ3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SH3RF3Q8TEJ3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC23.04■■□□□ 1.28
SH3RF3Q8TEJ3 LINC01521-201ENST00000504184 1943 ntBASIC23.04■■□□□ 1.28
SH3RF3Q8TEJ3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SH3RF3Q8TEJ3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SH3RF3Q8TEJ3 SLC25A1P2-201ENST00000430693 912 ntBASIC23.04■■□□□ 1.28
SH3RF3Q8TEJ3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SH3RF3Q8TEJ3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC23.04■■□□□ 1.28
SH3RF3Q8TEJ3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
SH3RF3Q8TEJ3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
SH3RF3Q8TEJ3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC23.04■■□□□ 1.28
SH3RF3Q8TEJ3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC23.04■■□□□ 1.28
SH3RF3Q8TEJ3 AC116562.4-202ENST00000641738 218 ntBASIC23.04■■□□□ 1.28
SH3RF3Q8TEJ3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SH3RF3Q8TEJ3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SH3RF3Q8TEJ3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SH3RF3Q8TEJ3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC23.04■■□□□ 1.28
SH3RF3Q8TEJ3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.04■■□□□ 1.28
SH3RF3Q8TEJ3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SH3RF3Q8TEJ3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC23.03■■□□□ 1.28
SH3RF3Q8TEJ3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SH3RF3Q8TEJ3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
SH3RF3Q8TEJ3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC23.03■■□□□ 1.28
SH3RF3Q8TEJ3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SH3RF3Q8TEJ3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC23.03■■□□□ 1.28
SH3RF3Q8TEJ3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SH3RF3Q8TEJ3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SH3RF3Q8TEJ3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SH3RF3Q8TEJ3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
SH3RF3Q8TEJ3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SH3RF3Q8TEJ3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC23.03■■□□□ 1.28
SH3RF3Q8TEJ3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SH3RF3Q8TEJ3 LIN28AP1-201ENST00000429574 405 ntBASIC23.03■■□□□ 1.28
SH3RF3Q8TEJ3 AC007663.1-201ENST00000438948 1240 ntBASIC23.03■■□□□ 1.28
SH3RF3Q8TEJ3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC23.03■■□□□ 1.28
SH3RF3Q8TEJ3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SH3RF3Q8TEJ3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC23.03■■□□□ 1.28
SH3RF3Q8TEJ3 CKBP1-201ENST00000565489 1086 ntBASIC23.03■■□□□ 1.28
SH3RF3Q8TEJ3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
SH3RF3Q8TEJ3 AL023803.3-201ENST00000615559 522 ntBASIC23.03■■□□□ 1.28
SH3RF3Q8TEJ3 AC006011.2-201ENST00000621313 1158 ntBASIC23.03■■□□□ 1.28
SH3RF3Q8TEJ3 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SH3RF3Q8TEJ3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
SH3RF3Q8TEJ3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.03■■□□□ 1.28
SH3RF3Q8TEJ3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
SH3RF3Q8TEJ3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC23.02■■□□□ 1.28
SH3RF3Q8TEJ3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SH3RF3Q8TEJ3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SH3RF3Q8TEJ3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
SH3RF3Q8TEJ3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC23.02■■□□□ 1.28
SH3RF3Q8TEJ3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC23.02■■□□□ 1.28
SH3RF3Q8TEJ3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SH3RF3Q8TEJ3 AC104417.2-201ENST00000562989 1793 ntBASIC23.02■■□□□ 1.28
SH3RF3Q8TEJ3 AC092338.2-201ENST00000568827 1415 ntBASIC23.02■■□□□ 1.28
SH3RF3Q8TEJ3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SH3RF3Q8TEJ3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SH3RF3Q8TEJ3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SH3RF3Q8TEJ3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SH3RF3Q8TEJ3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC23.02■■□□□ 1.28
SH3RF3Q8TEJ3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SH3RF3Q8TEJ3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SH3RF3Q8TEJ3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC23.02■■□□□ 1.28
SH3RF3Q8TEJ3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
SH3RF3Q8TEJ3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC23.02■■□□□ 1.28
SH3RF3Q8TEJ3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC23.02■■□□□ 1.28
SH3RF3Q8TEJ3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
SH3RF3Q8TEJ3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SH3RF3Q8TEJ3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SH3RF3Q8TEJ3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SH3RF3Q8TEJ3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SH3RF3Q8TEJ3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC23.02■■□□□ 1.28
SH3RF3Q8TEJ3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC23.02■■□□□ 1.28
SH3RF3Q8TEJ3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SH3RF3Q8TEJ3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
SH3RF3Q8TEJ3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
SH3RF3Q8TEJ3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
SH3RF3Q8TEJ3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC23.01■■□□□ 1.27
SH3RF3Q8TEJ3 KRT8P11-201ENST00000409686 1436 ntBASIC23.01■■□□□ 1.27
SH3RF3Q8TEJ3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
SH3RF3Q8TEJ3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SH3RF3Q8TEJ3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC23.01■■□□□ 1.27
SH3RF3Q8TEJ3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC23.01■■□□□ 1.27
SH3RF3Q8TEJ3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SH3RF3Q8TEJ3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
SH3RF3Q8TEJ3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SH3RF3Q8TEJ3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SH3RF3Q8TEJ3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC23.01■■□□□ 1.27
SH3RF3Q8TEJ3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SH3RF3Q8TEJ3 CCR12P-201ENST00000446203 998 ntBASIC23.01■■□□□ 1.27
SH3RF3Q8TEJ3 ATP5G1P1-201ENST00000448724 379 ntBASIC23.01■■□□□ 1.27
SH3RF3Q8TEJ3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC23.01■■□□□ 1.27
SH3RF3Q8TEJ3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SH3RF3Q8TEJ3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SH3RF3Q8TEJ3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
SH3RF3Q8TEJ3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC23.01■■□□□ 1.27
SH3RF3Q8TEJ3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms