Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.14■□□□□ 0.49
NUP43Q8NFH3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NUP43Q8NFH3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NUP43Q8NFH3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
NUP43Q8NFH3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NUP43Q8NFH3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NUP43Q8NFH3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NUP43Q8NFH3 AC087289.5-201ENST00000586076 3175 ntBASIC18.14■□□□□ 0.49
NUP43Q8NFH3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NUP43Q8NFH3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NUP43Q8NFH3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NUP43Q8NFH3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NUP43Q8NFH3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.13■□□□□ 0.49
NUP43Q8NFH3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.13■□□□□ 0.49
NUP43Q8NFH3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NUP43Q8NFH3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NUP43Q8NFH3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NUP43Q8NFH3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NUP43Q8NFH3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NUP43Q8NFH3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NUP43Q8NFH3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.13■□□□□ 0.49
NUP43Q8NFH3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.13■□□□□ 0.49
NUP43Q8NFH3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.13■□□□□ 0.49
NUP43Q8NFH3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
NUP43Q8NFH3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.13■□□□□ 0.49
NUP43Q8NFH3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.13■□□□□ 0.49
NUP43Q8NFH3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.13■□□□□ 0.49
NUP43Q8NFH3 AC069544.1-201ENST00000609399 999 ntBASIC18.13■□□□□ 0.49
NUP43Q8NFH3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NUP43Q8NFH3 AC120498.9-201ENST00000339021 3867 ntBASIC18.13■□□□□ 0.49
NUP43Q8NFH3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NUP43Q8NFH3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NUP43Q8NFH3 AC018445.3-201ENST00000624177 1945 ntBASIC18.13■□□□□ 0.49
NUP43Q8NFH3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NUP43Q8NFH3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
NUP43Q8NFH3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.13■□□□□ 0.49
NUP43Q8NFH3 NBPF21P-201ENST00000425093 1451 ntBASIC18.13■□□□□ 0.49
NUP43Q8NFH3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.13■□□□□ 0.49
NUP43Q8NFH3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
NUP43Q8NFH3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NUP43Q8NFH3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.12■□□□□ 0.49
NUP43Q8NFH3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
NUP43Q8NFH3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NUP43Q8NFH3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
NUP43Q8NFH3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NUP43Q8NFH3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NUP43Q8NFH3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NUP43Q8NFH3 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NUP43Q8NFH3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NUP43Q8NFH3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NUP43Q8NFH3 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.12■□□□□ 0.49
NUP43Q8NFH3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.12■□□□□ 0.49
NUP43Q8NFH3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NUP43Q8NFH3 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
NUP43Q8NFH3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NUP43Q8NFH3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NUP43Q8NFH3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NUP43Q8NFH3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NUP43Q8NFH3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NUP43Q8NFH3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
NUP43Q8NFH3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
NUP43Q8NFH3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
NUP43Q8NFH3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
NUP43Q8NFH3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
NUP43Q8NFH3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NUP43Q8NFH3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NUP43Q8NFH3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NUP43Q8NFH3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.11■□□□□ 0.49
NUP43Q8NFH3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NUP43Q8NFH3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NUP43Q8NFH3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NUP43Q8NFH3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.11■□□□□ 0.49
NUP43Q8NFH3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
NUP43Q8NFH3 ESRRAP1-201ENST00000400596 1257 ntBASIC18.11■□□□□ 0.49
NUP43Q8NFH3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.11■□□□□ 0.49
NUP43Q8NFH3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.11■□□□□ 0.49
NUP43Q8NFH3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NUP43Q8NFH3 AC233263.1-201ENST00000578059 224 ntBASIC18.11■□□□□ 0.49
NUP43Q8NFH3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.11■□□□□ 0.49
NUP43Q8NFH3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NUP43Q8NFH3 MTDHP1-201ENST00000605323 784 ntBASIC18.11■□□□□ 0.49
NUP43Q8NFH3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NUP43Q8NFH3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NUP43Q8NFH3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NUP43Q8NFH3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NUP43Q8NFH3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.11■□□□□ 0.49
NUP43Q8NFH3 AC104417.2-201ENST00000562989 1793 ntBASIC18.11■□□□□ 0.49
NUP43Q8NFH3 BX323043.1-201ENST00000641006 1765 ntBASIC18.11■□□□□ 0.49
NUP43Q8NFH3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NUP43Q8NFH3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.11■□□□□ 0.49
NUP43Q8NFH3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.11■□□□□ 0.49
NUP43Q8NFH3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.11■□□□□ 0.49
NUP43Q8NFH3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NUP43Q8NFH3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NUP43Q8NFH3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
NUP43Q8NFH3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NUP43Q8NFH3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.1■□□□□ 0.49
NUP43Q8NFH3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NUP43Q8NFH3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NUP43Q8NFH3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms