Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST2H3AQ71DI3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
HIST2H3AQ71DI3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIST2H3AQ71DI3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
HIST2H3AQ71DI3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIST2H3AQ71DI3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIST2H3AQ71DI3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.02■□□□□ 0.31
HIST2H3AQ71DI3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIST2H3AQ71DI3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.02■□□□□ 0.31
HIST2H3AQ71DI3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIST2H3AQ71DI3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
HIST2H3AQ71DI3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST2H3AQ71DI3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST2H3AQ71DI3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST2H3AQ71DI3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.01■□□□□ 0.31
HIST2H3AQ71DI3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST2H3AQ71DI3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HIST2H3AQ71DI3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST2H3AQ71DI3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST2H3AQ71DI3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
HIST2H3AQ71DI3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST2H3AQ71DI3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST2H3AQ71DI3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HIST2H3AQ71DI3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.01■□□□□ 0.31
HIST2H3AQ71DI3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HIST2H3AQ71DI3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.01■□□□□ 0.31
HIST2H3AQ71DI3 RNA5SP413-201ENST00000516373 109 ntBASIC17.01■□□□□ 0.31
HIST2H3AQ71DI3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.01■□□□□ 0.31
HIST2H3AQ71DI3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
HIST2H3AQ71DI3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.01■□□□□ 0.31
HIST2H3AQ71DI3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST2H3AQ71DI3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST2H3AQ71DI3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST2H3AQ71DI3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
HIST2H3AQ71DI3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST2H3AQ71DI3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST2H3AQ71DI3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.01■□□□□ 0.31
HIST2H3AQ71DI3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HIST2H3AQ71DI3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST2H3AQ71DI3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST2H3AQ71DI3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HIST2H3AQ71DI3 ANKRD18DP-204ENST00000455355 1975 ntBASIC17■□□□□ 0.31
HIST2H3AQ71DI3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HIST2H3AQ71DI3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
HIST2H3AQ71DI3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HIST2H3AQ71DI3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HIST2H3AQ71DI3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
HIST2H3AQ71DI3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HIST2H3AQ71DI3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17■□□□□ 0.31
HIST2H3AQ71DI3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17■□□□□ 0.31
HIST2H3AQ71DI3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
HIST2H3AQ71DI3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
HIST2H3AQ71DI3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17■□□□□ 0.31
HIST2H3AQ71DI3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HIST2H3AQ71DI3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
HIST2H3AQ71DI3 TUBB8P6-201ENST00000436895 1288 ntBASIC17■□□□□ 0.31
HIST2H3AQ71DI3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17■□□□□ 0.31
HIST2H3AQ71DI3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17■□□□□ 0.31
HIST2H3AQ71DI3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
HIST2H3AQ71DI3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17■□□□□ 0.31
HIST2H3AQ71DI3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17■□□□□ 0.31
HIST2H3AQ71DI3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17■□□□□ 0.31
HIST2H3AQ71DI3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
HIST2H3AQ71DI3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
HIST2H3AQ71DI3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
HIST2H3AQ71DI3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17■□□□□ 0.31
HIST2H3AQ71DI3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17■□□□□ 0.31
HIST2H3AQ71DI3 Six3os1_6.1-201ENST00000620790 196 ntBASIC17■□□□□ 0.31
HIST2H3AQ71DI3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HIST2H3AQ71DI3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17■□□□□ 0.31
HIST2H3AQ71DI3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
HIST2H3AQ71DI3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
HIST2H3AQ71DI3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17■□□□□ 0.31
HIST2H3AQ71DI3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIST2H3AQ71DI3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.99■□□□□ 0.31
HIST2H3AQ71DI3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.99■□□□□ 0.31
HIST2H3AQ71DI3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIST2H3AQ71DI3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HIST2H3AQ71DI3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIST2H3AQ71DI3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
HIST2H3AQ71DI3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIST2H3AQ71DI3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
HIST2H3AQ71DI3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HIST2H3AQ71DI3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.99■□□□□ 0.31
HIST2H3AQ71DI3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIST2H3AQ71DI3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HIST2H3AQ71DI3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
HIST2H3AQ71DI3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.99■□□□□ 0.31
HIST2H3AQ71DI3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HIST2H3AQ71DI3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.99■□□□□ 0.31
HIST2H3AQ71DI3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.99■□□□□ 0.31
HIST2H3AQ71DI3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.99■□□□□ 0.31
HIST2H3AQ71DI3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIST2H3AQ71DI3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
HIST2H3AQ71DI3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIST2H3AQ71DI3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.99■□□□□ 0.31
HIST2H3AQ71DI3 AC104417.2-201ENST00000562989 1793 ntBASIC16.99■□□□□ 0.31
HIST2H3AQ71DI3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.99■□□□□ 0.31
HIST2H3AQ71DI3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HIST2H3AQ71DI3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms