Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.41■□□□□ 0.38
NHLRC1Q6VVB1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.41■□□□□ 0.38
NHLRC1Q6VVB1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NHLRC1Q6VVB1 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.41■□□□□ 0.38
NHLRC1Q6VVB1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
NHLRC1Q6VVB1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
NHLRC1Q6VVB1 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NHLRC1Q6VVB1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.41■□□□□ 0.38
NHLRC1Q6VVB1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.41■□□□□ 0.38
NHLRC1Q6VVB1 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.41■□□□□ 0.38
NHLRC1Q6VVB1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NHLRC1Q6VVB1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NHLRC1Q6VVB1 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
NHLRC1Q6VVB1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NHLRC1Q6VVB1 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NHLRC1Q6VVB1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NHLRC1Q6VVB1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NHLRC1Q6VVB1 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NHLRC1Q6VVB1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NHLRC1Q6VVB1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NHLRC1Q6VVB1 AC005332.7-201ENST00000614046 2005 ntBASIC17.4■□□□□ 0.38
NHLRC1Q6VVB1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.4■□□□□ 0.38
NHLRC1Q6VVB1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
NHLRC1Q6VVB1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NHLRC1Q6VVB1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NHLRC1Q6VVB1 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
NHLRC1Q6VVB1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NHLRC1Q6VVB1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NHLRC1Q6VVB1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NHLRC1Q6VVB1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NHLRC1Q6VVB1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NHLRC1Q6VVB1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NHLRC1Q6VVB1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.4■□□□□ 0.38
NHLRC1Q6VVB1 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NHLRC1Q6VVB1 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.4■□□□□ 0.38
NHLRC1Q6VVB1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.4■□□□□ 0.38
NHLRC1Q6VVB1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.4■□□□□ 0.38
NHLRC1Q6VVB1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.4■□□□□ 0.38
NHLRC1Q6VVB1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NHLRC1Q6VVB1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.4■□□□□ 0.38
NHLRC1Q6VVB1 MIR4651-201ENST00000582622 73 ntBASIC17.4■□□□□ 0.38
NHLRC1Q6VVB1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.4■□□□□ 0.38
NHLRC1Q6VVB1 AC069544.1-201ENST00000609399 999 ntBASIC17.4■□□□□ 0.38
NHLRC1Q6VVB1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.4■□□□□ 0.38
NHLRC1Q6VVB1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NHLRC1Q6VVB1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.4■□□□□ 0.38
NHLRC1Q6VVB1 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NHLRC1Q6VVB1 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NHLRC1Q6VVB1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NHLRC1Q6VVB1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NHLRC1Q6VVB1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NHLRC1Q6VVB1 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
NHLRC1Q6VVB1 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NHLRC1Q6VVB1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
NHLRC1Q6VVB1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
NHLRC1Q6VVB1 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.39■□□□□ 0.37
NHLRC1Q6VVB1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NHLRC1Q6VVB1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NHLRC1Q6VVB1 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NHLRC1Q6VVB1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NHLRC1Q6VVB1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.39■□□□□ 0.37
NHLRC1Q6VVB1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NHLRC1Q6VVB1 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NHLRC1Q6VVB1 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.39■□□□□ 0.37
NHLRC1Q6VVB1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
NHLRC1Q6VVB1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.39■□□□□ 0.37
NHLRC1Q6VVB1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
NHLRC1Q6VVB1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.39■□□□□ 0.37
NHLRC1Q6VVB1 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NHLRC1Q6VVB1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NHLRC1Q6VVB1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NHLRC1Q6VVB1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NHLRC1Q6VVB1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NHLRC1Q6VVB1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NHLRC1Q6VVB1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NHLRC1Q6VVB1 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NHLRC1Q6VVB1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NHLRC1Q6VVB1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NHLRC1Q6VVB1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NHLRC1Q6VVB1 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NHLRC1Q6VVB1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.38■□□□□ 0.37
NHLRC1Q6VVB1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NHLRC1Q6VVB1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NHLRC1Q6VVB1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NHLRC1Q6VVB1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.38■□□□□ 0.37
NHLRC1Q6VVB1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NHLRC1Q6VVB1 KRT17P3-201ENST00000420566 1262 ntBASIC17.38■□□□□ 0.37
NHLRC1Q6VVB1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NHLRC1Q6VVB1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.38■□□□□ 0.37
NHLRC1Q6VVB1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.38■□□□□ 0.37
NHLRC1Q6VVB1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.38■□□□□ 0.37
NHLRC1Q6VVB1 CD99P1-205ENST00000527459 561 ntBASIC17.38■□□□□ 0.37
NHLRC1Q6VVB1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.38■□□□□ 0.37
NHLRC1Q6VVB1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.38■□□□□ 0.37
NHLRC1Q6VVB1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.38■□□□□ 0.37
NHLRC1Q6VVB1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
NHLRC1Q6VVB1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NHLRC1Q6VVB1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NHLRC1Q6VVB1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
NHLRC1Q6VVB1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms