Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNKSR3Q6P9H4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNKSR3Q6P9H4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CNKSR3Q6P9H4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CNKSR3Q6P9H4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
CNKSR3Q6P9H4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNKSR3Q6P9H4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.9■□□□□ 0.94
CNKSR3Q6P9H4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNKSR3Q6P9H4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNKSR3Q6P9H4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNKSR3Q6P9H4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.9■□□□□ 0.94
CNKSR3Q6P9H4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CNKSR3Q6P9H4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.9■□□□□ 0.94
CNKSR3Q6P9H4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.9■□□□□ 0.94
CNKSR3Q6P9H4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CNKSR3Q6P9H4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNKSR3Q6P9H4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNKSR3Q6P9H4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNKSR3Q6P9H4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNKSR3Q6P9H4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNKSR3Q6P9H4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.9■□□□□ 0.94
CNKSR3Q6P9H4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CNKSR3Q6P9H4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
CNKSR3Q6P9H4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.89■□□□□ 0.94
CNKSR3Q6P9H4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.89■□□□□ 0.93
CNKSR3Q6P9H4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CNKSR3Q6P9H4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
CNKSR3Q6P9H4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.89■□□□□ 0.93
CNKSR3Q6P9H4 SPDYE15P-201ENST00000424157 909 ntBASIC20.89■□□□□ 0.93
CNKSR3Q6P9H4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.89■□□□□ 0.93
CNKSR3Q6P9H4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.89■□□□□ 0.93
CNKSR3Q6P9H4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.89■□□□□ 0.93
CNKSR3Q6P9H4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.89■□□□□ 0.93
CNKSR3Q6P9H4 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.89■□□□□ 0.93
CNKSR3Q6P9H4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CNKSR3Q6P9H4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CNKSR3Q6P9H4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.88■□□□□ 0.93
CNKSR3Q6P9H4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CNKSR3Q6P9H4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CNKSR3Q6P9H4 AC133561.1-201ENST00000568600 2415 ntBASIC20.88■□□□□ 0.93
CNKSR3Q6P9H4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CNKSR3Q6P9H4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNKSR3Q6P9H4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNKSR3Q6P9H4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CNKSR3Q6P9H4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.88■□□□□ 0.93
CNKSR3Q6P9H4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.88■□□□□ 0.93
CNKSR3Q6P9H4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.88■□□□□ 0.93
CNKSR3Q6P9H4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.88■□□□□ 0.93
CNKSR3Q6P9H4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.88■□□□□ 0.93
CNKSR3Q6P9H4 AC012313.10-201ENST00000623509 926 ntBASIC20.88■□□□□ 0.93
CNKSR3Q6P9H4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.88■□□□□ 0.93
CNKSR3Q6P9H4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNKSR3Q6P9H4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNKSR3Q6P9H4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNKSR3Q6P9H4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
CNKSR3Q6P9H4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNKSR3Q6P9H4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNKSR3Q6P9H4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.87■□□□□ 0.93
CNKSR3Q6P9H4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNKSR3Q6P9H4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNKSR3Q6P9H4 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNKSR3Q6P9H4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.87■□□□□ 0.93
CNKSR3Q6P9H4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.87■□□□□ 0.93
CNKSR3Q6P9H4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CNKSR3Q6P9H4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.87■□□□□ 0.93
CNKSR3Q6P9H4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.87■□□□□ 0.93
CNKSR3Q6P9H4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.87■□□□□ 0.93
CNKSR3Q6P9H4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNKSR3Q6P9H4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNKSR3Q6P9H4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNKSR3Q6P9H4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CNKSR3Q6P9H4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.87■□□□□ 0.93
CNKSR3Q6P9H4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.87■□□□□ 0.93
CNKSR3Q6P9H4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.86■□□□□ 0.93
CNKSR3Q6P9H4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.86■□□□□ 0.93
CNKSR3Q6P9H4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNKSR3Q6P9H4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CNKSR3Q6P9H4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNKSR3Q6P9H4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CNKSR3Q6P9H4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNKSR3Q6P9H4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.86■□□□□ 0.93
CNKSR3Q6P9H4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CNKSR3Q6P9H4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNKSR3Q6P9H4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.86■□□□□ 0.93
CNKSR3Q6P9H4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CNKSR3Q6P9H4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNKSR3Q6P9H4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNKSR3Q6P9H4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNKSR3Q6P9H4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.85■□□□□ 0.93
CNKSR3Q6P9H4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNKSR3Q6P9H4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CNKSR3Q6P9H4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNKSR3Q6P9H4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CNKSR3Q6P9H4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNKSR3Q6P9H4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNKSR3Q6P9H4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CNKSR3Q6P9H4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNKSR3Q6P9H4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.85■□□□□ 0.93
CNKSR3Q6P9H4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNKSR3Q6P9H4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms