Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.88■□□□□ 0.61
RIF1Q5UIP0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RIF1Q5UIP0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RIF1Q5UIP0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
RIF1Q5UIP0 KRT8P41-201ENST00000533985 1514 ntBASIC18.88■□□□□ 0.61
RIF1Q5UIP0 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RIF1Q5UIP0 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RIF1Q5UIP0 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RIF1Q5UIP0 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RIF1Q5UIP0 AC138894.3-201ENST00000603787 634 ntBASIC18.88■□□□□ 0.61
RIF1Q5UIP0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.88■□□□□ 0.61
RIF1Q5UIP0 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.88■□□□□ 0.61
RIF1Q5UIP0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RIF1Q5UIP0 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RIF1Q5UIP0 AL121603.2-201ENST00000557373 2117 ntBASIC18.88■□□□□ 0.61
RIF1Q5UIP0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.88■□□□□ 0.61
RIF1Q5UIP0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RIF1Q5UIP0 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RIF1Q5UIP0 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RIF1Q5UIP0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RIF1Q5UIP0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.88■□□□□ 0.61
RIF1Q5UIP0 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RIF1Q5UIP0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RIF1Q5UIP0 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RIF1Q5UIP0 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
RIF1Q5UIP0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RIF1Q5UIP0 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.88■□□□□ 0.61
RIF1Q5UIP0 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.88■□□□□ 0.61
RIF1Q5UIP0 RNF126P1-202ENST00000569893 925 ntBASIC18.88■□□□□ 0.61
RIF1Q5UIP0 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.88■□□□□ 0.61
RIF1Q5UIP0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.88■□□□□ 0.61
RIF1Q5UIP0 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RIF1Q5UIP0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RIF1Q5UIP0 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RIF1Q5UIP0 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RIF1Q5UIP0 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.87■□□□□ 0.61
RIF1Q5UIP0 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RIF1Q5UIP0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.87■□□□□ 0.61
RIF1Q5UIP0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RIF1Q5UIP0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.87■□□□□ 0.61
RIF1Q5UIP0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RIF1Q5UIP0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RIF1Q5UIP0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RIF1Q5UIP0 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RIF1Q5UIP0 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RIF1Q5UIP0 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.87■□□□□ 0.61
RIF1Q5UIP0 FAM197Y8-203ENST00000450145 560 ntBASIC18.87■□□□□ 0.61
RIF1Q5UIP0 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.87■□□□□ 0.61
RIF1Q5UIP0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RIF1Q5UIP0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.87■□□□□ 0.61
RIF1Q5UIP0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RIF1Q5UIP0 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.86■□□□□ 0.61
RIF1Q5UIP0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RIF1Q5UIP0 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
RIF1Q5UIP0 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.86■□□□□ 0.61
RIF1Q5UIP0 AC073648.2-201ENST00000510116 352 ntBASIC18.86■□□□□ 0.61
RIF1Q5UIP0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.86■□□□□ 0.61
RIF1Q5UIP0 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.86■□□□□ 0.61
RIF1Q5UIP0 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
RIF1Q5UIP0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RIF1Q5UIP0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RIF1Q5UIP0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RIF1Q5UIP0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.86■□□□□ 0.61
RIF1Q5UIP0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RIF1Q5UIP0 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RIF1Q5UIP0 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.86■□□□□ 0.61
RIF1Q5UIP0 SAPCD2P3-201ENST00000455031 850 ntBASIC18.86■□□□□ 0.61
RIF1Q5UIP0 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RIF1Q5UIP0 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RIF1Q5UIP0 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.86■□□□□ 0.61
RIF1Q5UIP0 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.86■□□□□ 0.61
RIF1Q5UIP0 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.86■□□□□ 0.61
RIF1Q5UIP0 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RIF1Q5UIP0 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RIF1Q5UIP0 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RIF1Q5UIP0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RIF1Q5UIP0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.85■□□□□ 0.61
RIF1Q5UIP0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RIF1Q5UIP0 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RIF1Q5UIP0 AC104819.1-201ENST00000504587 486 ntBASIC18.85■□□□□ 0.61
RIF1Q5UIP0 TP73-AS1-207ENST00000624167 988 ntBASIC18.85■□□□□ 0.61
RIF1Q5UIP0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RIF1Q5UIP0 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RIF1Q5UIP0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.85■□□□□ 0.61
RIF1Q5UIP0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.85■□□□□ 0.61
RIF1Q5UIP0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.85■□□□□ 0.61
RIF1Q5UIP0 LINC01465-201ENST00000408887 1940 ntBASIC18.85■□□□□ 0.61
RIF1Q5UIP0 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.85■□□□□ 0.61
RIF1Q5UIP0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RIF1Q5UIP0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RIF1Q5UIP0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RIF1Q5UIP0 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RIF1Q5UIP0 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.85■□□□□ 0.61
RIF1Q5UIP0 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.85■□□□□ 0.61
RIF1Q5UIP0 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.85■□□□□ 0.61
RIF1Q5UIP0 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.85■□□□□ 0.61
RIF1Q5UIP0 ECEL1P1-201ENST00000373592 1742 ntBASIC18.85■□□□□ 0.61
RIF1Q5UIP0 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.85■□□□□ 0.61
RIF1Q5UIP0 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.84■□□□□ 0.61
RIF1Q5UIP0 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms